Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 AL390955.1-201ENST00000428694 934 ntBASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 KRT18P22-201ENST00000402024 1347 ntBASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 AC093484.2-201ENST00000580996 2166 ntBASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAV25A0A0B4J276 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 FP475955.4-201ENST00000623131 1990 ntBASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 AL512604.3-201ENST00000569583 964 ntBASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 LINC01023-201ENST00000606054 436 ntBASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 AC010653.2-201ENST00000623505 997 ntBASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 AL032819.2-201ENST00000624543 2162 ntBASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV25A0A0B4J276 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 KRT8P3-201ENST00000519669 1449 ntBASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV25A0A0B4J276 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms