Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 NCF1B-203ENST00000435988 1254 ntBASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 AC005829.2-201ENST00000571422 1056 ntBASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 PFKL-212ENST00000628044 129 ntTSL 3 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV8-4A0A0B4J246 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 DUSP5P2-201ENST00000426873 1033 ntBASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 AC097658.1-201ENST00000475555 843 ntBASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 AC012313.1-201ENST00000593393 3059 ntBASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV8-4A0A0B4J246 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV8-4A0A0B4J246 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms