Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TRBV25-1A0A075B6N4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV25-1A0A075B6N4 AC005181.1-201ENST00000604782 1256 ntBASIC13.71□□□□□ -0.21
TRBV25-1A0A075B6N4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV25-1A0A075B6N4 ANKRD20A6P-201ENST00000618763 204 ntBASIC13.71□□□□□ -0.21
TRBV25-1A0A075B6N4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV25-1A0A075B6N4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.71□□□□□ -0.21
TRBV25-1A0A075B6N4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
TRBV25-1A0A075B6N4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV25-1A0A075B6N4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV25-1A0A075B6N4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV25-1A0A075B6N4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
TRBV25-1A0A075B6N4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
TRBV25-1A0A075B6N4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV25-1A0A075B6N4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV25-1A0A075B6N4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
TRBV25-1A0A075B6N4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV25-1A0A075B6N4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
TRBV25-1A0A075B6N4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
TRBV25-1A0A075B6N4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV25-1A0A075B6N4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV25-1A0A075B6N4 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.71□□□□□ -0.22
TRBV25-1A0A075B6N4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
TRBV25-1A0A075B6N4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV25-1A0A075B6N4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV25-1A0A075B6N4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRBV25-1A0A075B6N4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 AC026271.2-201ENST00000428091 497 ntBASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 AL162430.1-201ENST00000480705 870 ntBASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 TNRC18P3-201ENST00000441896 2691 ntBASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms