Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 RPS12P18-201ENST00000442381 270 ntBASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 RPL23AP45-201ENST00000476406 468 ntBASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 AC098799.2-201ENST00000509466 868 ntBASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 SNORA19.2-201ENST00000516013 114 ntBASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 RPPH1-2P-201ENST00000516688 293 ntBASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 SNORA31.23-201ENST00000517219 133 ntBASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 AC078814.3-201ENST00000553036 491 ntBASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 AC090897.2-201ENST00000581715 130 ntBASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 AC105245.1-201ENST00000581934 244 ntBASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 MIR3199-1-201ENST00000582434 88 ntBASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 APOOP1-201ENST00000604695 592 ntBASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 AL356157.2-201ENST00000605122 111 ntBASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 ATP1B3P1-201ENST00000605365 821 ntBASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 RNU6-89P-201ENST00000606519 100 ntBASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 RNU6-6P-201ENST00000606623 107 ntBASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 AL161431.1-201ENST00000618966 4205 ntBASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PCDHGB3Q9Y5G1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 AC131280.1-202ENST00000624067 4211 ntBASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 Y_RNA.89-201ENST00000363031 102 ntBASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 RNU6-527P-201ENST00000363425 104 ntBASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 RNU6-525P-201ENST00000363685 104 ntBASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 MIR1277-201ENST00000408536 78 ntBASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 HMGN2P35-201ENST00000412164 270 ntBASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 AC138623.1-201ENST00000418060 216 ntBASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 AC006028.1-201ENST00000438379 402 ntBASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 AC097462.2-201ENST00000504623 481 ntBASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 BNIP3P16-201ENST00000589779 534 ntBASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 AC010525.2-201ENST00000590920 195 ntBASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHGB3Q9Y5G1 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 Y_RNA.38-201ENST00000362617 102 ntBASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 RNU1-57P-201ENST00000384491 166 ntBASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 SNORD115-47-201ENST00000391226 86 ntBASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 MIR548F1-201ENST00000408667 84 ntBASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 CYCSP48-201ENST00000417124 323 ntBASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 RPS3AP44-201ENST00000425466 790 ntBASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 AL121769.1-201ENST00000469473 401 ntBASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 TRBVA-201ENST00000498804 316 ntBASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 AIG1P1-201ENST00000503376 148 ntBASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 AC011352.1-201ENST00000512300 793 ntBASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 SMURF2P1-201ENST00000514992 481 ntBASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 PSMA3P-201ENST00000555485 635 ntBASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 MIR5004-201ENST00000579078 107 ntBASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 AC092794.1-201ENST00000612734 582 ntBASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 AC091903.1-201ENST00000624322 454 ntBASIC3.04□□□□□ -1.92
PCDHGB3Q9Y5G1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 Y_RNA.100-201ENST00000363141 102 ntBASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 RNU6-105P-201ENST00000363909 104 ntBASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 RNU6-534P-201ENST00000364877 106 ntBASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 Y_RNA.295-201ENST00000364918 102 ntBASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 RNA5SP240-201ENST00000365355 128 ntBASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 Y_RNA.378-201ENST00000365652 113 ntBASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 RNU2-23P-201ENST00000410545 195 ntBASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 BX323014.1-201ENST00000412876 237 ntBASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 RPL30P4-201ENST00000429309 333 ntBASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 RPL7P12-201ENST00000446719 750 ntBASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 AC112771.1-201ENST00000463581 102 ntBASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 AP001025.1-201ENST00000486139 332 ntBASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 AC096576.1-201ENST00000489014 359 ntBASIC3.03□□□□□ -1.92
PCDHGB3Q9Y5G1 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms