Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 RPS27P27-201ENST00000498779 255 ntBASIC2.87□□□□□ -1.95
LIMA1Q9UHB6 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.87□□□□□ -1.95
LIMA1Q9UHB6 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.87□□□□□ -1.95
LIMA1Q9UHB6 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.87□□□□□ -1.95
LIMA1Q9UHB6 OR1M4P-201ENST00000589199 287 ntBASIC2.87□□□□□ -1.95
LIMA1Q9UHB6 AP000787.2-201ENST00000604432 568 ntBASIC2.87□□□□□ -1.95
LIMA1Q9UHB6 uc_338.14-201ENST00000613162 166 ntBASIC2.87□□□□□ -1.95
LIMA1Q9UHB6 AL442067.2-201ENST00000614033 363 ntBASIC2.87□□□□□ -1.95
LIMA1Q9UHB6 AC010297.1-201ENST00000623948 149 ntBASIC2.87□□□□□ -1.95
LIMA1Q9UHB6 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.87□□□□□ -1.95
LIMA1Q9UHB6 FER-210ENST00000628534 558 ntTSL 5 BASIC2.87□□□□□ -1.95
LIMA1Q9UHB6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.87□□□□□ -1.95
LIMA1Q9UHB6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.87□□□□□ -1.95
LIMA1Q9UHB6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.87□□□□□ -1.95
LIMA1Q9UHB6 Y_RNA.256-201ENST00000364594 104 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 RNU4-66P-201ENST00000365199 138 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 RNU4-12P-201ENST00000365233 139 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 RNU6-38P-201ENST00000384085 107 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 USP9YP20-201ENST00000419224 558 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 RPS15AP7-201ENST00000439294 405 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 RBMX2P4-201ENST00000441256 376 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 RNU6-333P-201ENST00000459117 107 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 S100A11P2-201ENST00000467589 312 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 MTCO3P38-201ENST00000468910 766 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 MED28P2-201ENST00000475771 317 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 RPL21P93-201ENST00000480465 489 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 SNORA25.17-201ENST00000517184 124 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 AC009163.5-201ENST00000575421 637 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 MIR4801-201ENST00000582704 82 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 MIR5092-201ENST00000583139 88 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 AC060766.3-201ENST00000591442 263 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 AL670379.10-201ENST00000604330 253 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 AL670379.9-201ENST00000605428 253 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 AC002044.1-201ENST00000606707 158 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 AC007336.1-201ENST00000576365 3828 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 AC026241.1-201ENST00000517873 2142 ntBASIC2.86□□□□□ -1.95
LIMA1Q9UHB6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 MAPK10-266ENST00000641066 6555 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 MIR6073-201ENST00000352083 89 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 RNU6-266P-201ENST00000364225 107 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 Y_RNA.248-201ENST00000364501 109 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 DEFA7P-201ENST00000382676 285 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 Y_RNA.450-201ENST00000384198 113 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 SNORD115-47-201ENST00000391226 86 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 AC006026.2-201ENST00000457376 180 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 AC079140.5-201ENST00000507882 310 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 SNORD60.2-201ENST00000516883 86 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 SNORA70.24-201ENST00000517233 118 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 CENPUP1-201ENST00000526649 1202 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 AC022080.3-201ENST00000544433 482 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 AC090115.3-201ENST00000553218 849 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 OR11H5P-201ENST00000554039 926 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 MIR3941-201ENST00000582572 103 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 AC019159.1-201ENST00000605094 187 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 AC093732.2-201ENST00000607950 274 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 Z82243.1-201ENST00000609432 473 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 RMST_7.1-201ENST00000621935 268 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 Z69720.2-201ENST00000624755 279 ntBASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LIMA1Q9UHB6 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 Y_RNA.38-201ENST00000362617 102 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 RNY4P14-201ENST00000363656 96 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 RNY3P3-201ENST00000363816 102 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 MIR514A2-201ENST00000385131 88 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 MIR514A3-201ENST00000385132 88 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 MIR9-1-201ENST00000385198 89 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 RNA5SP219-201ENST00000390940 113 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 RPL21P75-201ENST00000396599 483 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 RPL21P28-201ENST00000401418 483 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 RNU6-1328P-201ENST00000410938 106 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 MTND1P23-201ENST00000416931 372 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms