Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 RNU6-1140P-201ENST00000410517 106 ntBASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 RPL7P54-201ENST00000438336 674 ntBASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AL445687.1-201ENST00000439946 251 ntBASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 HIGD1AP2-201ENST00000446367 280 ntBASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AL356010.1-201ENST00000456364 102 ntBASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 SNRPFP3-201ENST00000457792 225 ntBASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AC112771.1-201ENST00000463581 102 ntBASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 S100A11P2-201ENST00000467589 312 ntBASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AC011825.1-201ENST00000484967 388 ntBASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 RPL36AP48-201ENST00000485521 314 ntBASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 HMGB1P30-201ENST00000492455 606 ntBASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AC074344.1-201ENST00000512823 224 ntBASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AC104136.1-201ENST00000512969 394 ntBASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 RN7SKP24-201ENST00000515888 284 ntBASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 MIR5002-201ENST00000584713 97 ntBASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AL031601.2-202ENST00000622650 282 ntBASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AC124864.2-201ENST00000624736 186 ntBASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 AL354685.2-201ENST00000448218 1447 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 RNU6-942P-201ENST00000363002 107 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 RNU6-393P-201ENST00000384475 107 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 RNU6-1127P-201ENST00000384580 107 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 MIR483-201ENST00000385070 76 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 RNU6-780P-201ENST00000391030 104 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 CALM2P3-201ENST00000400429 449 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 RNU2-29P-201ENST00000410423 189 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 AC007064.1-201ENST00000412238 351 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 CYCSP33-201ENST00000414485 327 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 TOMM20P4-201ENST00000427861 435 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 AC073415.1-201ENST00000449240 153 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 AL441985.1-201ENST00000457727 251 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 AC025033.1-201ENST00000463883 194 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 GMFBP1-201ENST00000467831 427 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 AC023141.11-201ENST00000508864 202 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 AC026436.1-201ENST00000510537 270 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 AC022880.1-201ENST00000534017 973 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 HIF1AP1-201ENST00000553642 175 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 SNORD53-201ENST00000579969 78 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 AC078795.2-201ENST00000602835 1252 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 AL670379.10-201ENST00000604330 253 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 AL670379.9-201ENST00000605428 253 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 AC026585.1-201ENST00000619582 524 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 AC005609.4-201ENST00000625071 447 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 AC006020.1-201ENST00000420179 1854 ntBASIC2.34□□□□□ -2.03
VIPAS39Q9H9C1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.34□□□□□ -2.04
VIPAS39Q9H9C1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.34□□□□□ -2.04
VIPAS39Q9H9C1 MTND4P14-201ENST00000435799 1354 ntBASIC2.34□□□□□ -2.04
VIPAS39Q9H9C1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
VIPAS39Q9H9C1 ZNF658B-202ENST00000615961 3375 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 Z82209.1-201ENST00000422141 2135 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 AL109809.4-201ENST00000603520 2185 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-517P-201ENST00000384362 110 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 SNORD116-20-201ENST00000384529 92 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-748P-201ENST00000384648 107 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 SNORA16.2-201ENST00000390991 127 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 MTCO3P40-201ENST00000392516 676 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 RNU6-607P-201ENST00000411283 108 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 UBE2V1P10-201ENST00000414685 269 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 NUP35P1-201ENST00000422734 947 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 HMGB1P31-201ENST00000437242 427 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 PRPS1P1-201ENST00000445305 876 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 FDX1P2-201ENST00000450769 375 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 AC012308.1-201ENST00000451232 178 ntBASIC2.33□□□□□ -2.04
VIPAS39Q9H9C1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms