Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.09□□□□□ -2.23
VCX3BQ9H321 AC003071.1-201ENST00000451219 789 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.09□□□□□ -2.23
VCX3BQ9H321 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.09□□□□□ -2.23
VCX3BQ9H321 AC104982.1-201ENST00000478775 574 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.09□□□□□ -2.23
VCX3BQ9H321 RNU6-914P-201ENST00000516749 109 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.09□□□□□ -2.23
VCX3BQ9H321 AC068587.4-201ENST00000533893 186 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 AL157871.3-201ENST00000557231 293 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 AC025678.1-201ENST00000567861 338 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 AC136618.2-201ENST00000575091 400 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 MIR4648-201ENST00000580107 72 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 MIR544B-201ENST00000582372 78 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 AC091965.4-201ENST00000607691 587 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 AC072039.2-201ENST00000608883 439 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.09□□□□□ -2.23
VCX3BQ9H321 RNU6-1010P-201ENST00000362757 107 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 RNU6-723P-201ENST00000383973 107 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 MIR186-201ENST00000384988 86 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 MIR513A1-201ENST00000385138 129 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 RNU6-1000P-201ENST00000391066 106 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 SNORA40.6-201ENST00000391153 128 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 RNU6-174P-201ENST00000410406 106 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 RNU4-22P-201ENST00000411058 166 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.08□□□□□ -2.24
VCX3BQ9H321 RPL23AP36-201ENST00000413895 458 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 AC016831.2-201ENST00000417179 352 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 NCOR1P3-201ENST00000420479 303 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 AL022400.1-201ENST00000423946 935 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 RPS29P29-201ENST00000456396 171 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 AC004223.1-201ENST00000479840 271 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 RNU2-53P-201ENST00000516257 147 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 AC013828.2-201ENST00000532487 235 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 RAB11AP2-201ENST00000545905 639 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 AC012414.6-201ENST00000568241 401 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 MTCYBP33-201ENST00000575007 1130 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
VCX3BQ9H321 BNIP3P30-201ENST00000601184 574 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 AC022893.3-201ENST00000607665 437 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 AC009318.2-201ENST00000610917 651 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 AL365204.3-201ENST00000612448 685 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 AL589994.2-201ENST00000621124 579 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.08□□□□□ -2.24
VCX3BQ9H321 AC092656.1-203ENST00000624134 423 ntBASIC1.08□□□□□ -2.24
VCX3BQ9H321 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
VCX3BQ9H321 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
VCX3BQ9H321 Y_RNA.33-201ENST00000362591 102 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 RNU6-433P-201ENST00000363216 104 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 RNU6-1187P-201ENST00000364771 110 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 RNU6-487P-201ENST00000365430 104 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
VCX3BQ9H321 RNU6-611P-201ENST00000384276 104 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 RNU6-1274P-201ENST00000384557 107 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 ELOCP17-201ENST00000414751 326 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 OR6C66P-201ENST00000414917 930 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 AC092809.3-201ENST00000415453 231 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 AC138623.1-201ENST00000418060 216 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 ELOCP9-201ENST00000418624 239 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 PRELID3BP1-201ENST00000457142 540 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 AP001025.1-201ENST00000486139 332 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 AL133373.1-201ENST00000497098 94 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.07□□□□□ -2.24
VCX3BQ9H321 PTP4A1P4-201ENST00000512479 322 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 RNU6-677P-201ENST00000516914 101 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.07□□□□□ -2.24
VCX3BQ9H321 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.07□□□□□ -2.24
VCX3BQ9H321 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.07□□□□□ -2.24
VCX3BQ9H321 MIR4435-1-201ENST00000582552 80 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.07□□□□□ -2.24
VCX3BQ9H321 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.07□□□□□ -2.24
VCX3BQ9H321 VN1R82P-201ENST00000601481 356 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 AP001981.2-201ENST00000603241 418 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 AC123912.5-201ENST00000605470 343 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 AL391813.2-201ENST00000609113 322 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 AC108747.1-201ENST00000609508 535 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.07□□□□□ -2.24
VCX3BQ9H321 AL356596.1-201ENST00000624230 379 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 AC013437.2-201ENST00000639587 677 ntBASIC1.07□□□□□ -2.24
VCX3BQ9H321 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.07□□□□□ -2.24
VCX3BQ9H321 RNU6-858P-201ENST00000362436 107 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 RNU6-511P-201ENST00000363496 107 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 RNU6-1164P-201ENST00000364428 107 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 SNORA4.3-201ENST00000365564 137 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 RNU6-395P-201ENST00000365662 106 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.06□□□□□ -2.24
VCX3BQ9H321 RNU6-190P-201ENST00000384154 102 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 PIGPP2-201ENST00000411569 458 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.06□□□□□ -2.24
VCX3BQ9H321 RPS27P16-201ENST00000425758 201 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.06□□□□□ -2.24
VCX3BQ9H321 HMGB3P12-201ENST00000438745 556 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 RPL7P36-201ENST00000444633 681 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.06□□□□□ -2.24
VCX3BQ9H321 AL606517.1-201ENST00000446914 387 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.06□□□□□ -2.24
VCX3BQ9H321 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.06□□□□□ -2.24
VCX3BQ9H321 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.06□□□□□ -2.24
VCX3BQ9H321 AC010486.1-201ENST00000511793 424 ntBASIC1.06□□□□□ -2.24
VCX3BQ9H321 AP003392.2-201ENST00000527269 208 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms