Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
NKX6-2Q9C056 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.11□□□□□ -2.23
NKX6-2Q9C056 RNU4-82P-201ENST00000362443 140 ntBASIC1.11□□□□□ -2.23
NKX6-2Q9C056 SNORD14B-201ENST00000364533 90 ntBASIC1.11□□□□□ -2.23
NKX6-2Q9C056 RNY4P16-201ENST00000364768 94 ntBASIC1.11□□□□□ -2.23
NKX6-2Q9C056 RNU2-23P-201ENST00000410545 195 ntBASIC1.11□□□□□ -2.23
NKX6-2Q9C056 RNU2-62P-201ENST00000410868 191 ntBASIC1.11□□□□□ -2.23
NKX6-2Q9C056 RN7SKP284-201ENST00000411002 343 ntBASIC1.11□□□□□ -2.23
NKX6-2Q9C056 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.11□□□□□ -2.23
NKX6-2Q9C056 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.11□□□□□ -2.23
NKX6-2Q9C056 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.11□□□□□ -2.23
NKX6-2Q9C056 RPL30P13-201ENST00000418873 348 ntBASIC1.11□□□□□ -2.23
NKX6-2Q9C056 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.11□□□□□ -2.23
NKX6-2Q9C056 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.11□□□□□ -2.23
NKX6-2Q9C056 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.11□□□□□ -2.23
NKX6-2Q9C056 AL008629.1-201ENST00000438615 184 ntBASIC1.11□□□□□ -2.23
NKX6-2Q9C056 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.11□□□□□ -2.23
NKX6-2Q9C056 AC112206.3-201ENST00000514578 389 ntBASIC1.11□□□□□ -2.23
NKX6-2Q9C056 RN7SKP256-201ENST00000517201 314 ntBASIC1.11□□□□□ -2.23
NKX6-2Q9C056 MTATP6P15-201ENST00000527233 835 ntBASIC1.11□□□□□ -2.23
NKX6-2Q9C056 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.11□□□□□ -2.23
NKX6-2Q9C056 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
NKX6-2Q9C056 AC068338.1-201ENST00000565567 176 ntBASIC1.11□□□□□ -2.23
NKX6-2Q9C056 AC069431.2-201ENST00000604149 1099 ntBASIC1.11□□□□□ -2.23
NKX6-2Q9C056 AC103710.2-201ENST00000609912 942 ntBASIC1.11□□□□□ -2.23
NKX6-2Q9C056 AC091834.1-201ENST00000614543 472 ntBASIC1.11□□□□□ -2.23
NKX6-2Q9C056 AC004808.1-201ENST00000627671 721 ntBASIC1.11□□□□□ -2.23
NKX6-2Q9C056 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.11□□□□□ -2.23
NKX6-2Q9C056 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
NKX6-2Q9C056 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.11□□□□□ -2.23
NKX6-2Q9C056 MIR412-201ENST00000362142 91 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 RNU6-23P-201ENST00000363283 107 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 CBX3P9-201ENST00000402326 552 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 RNA5SP100-201ENST00000410903 110 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 RNA5SP59-201ENST00000410922 110 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 USP9YP18-201ENST00000425912 695 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 RPL23AP30-201ENST00000432419 501 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.1□□□□□ -2.23
NKX6-2Q9C056 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.1□□□□□ -2.23
NKX6-2Q9C056 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.1□□□□□ -2.23
NKX6-2Q9C056 SNRPGP13-201ENST00000442212 177 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.1□□□□□ -2.23
NKX6-2Q9C056 AL049873.1-201ENST00000480540 376 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 AC093259.1-201ENST00000509755 300 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.1□□□□□ -2.23
NKX6-2Q9C056 AC117532.1-201ENST00000514638 323 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 Y_RNA.687-201ENST00000516558 91 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 SNORA31.24-201ENST00000517232 57 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.1□□□□□ -2.23
NKX6-2Q9C056 COPS8P3-201ENST00000526024 482 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.1□□□□□ -2.23
NKX6-2Q9C056 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.1□□□□□ -2.23
NKX6-2Q9C056 AK6P1-201ENST00000540219 478 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.1□□□□□ -2.23
NKX6-2Q9C056 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.1□□□□□ -2.23
NKX6-2Q9C056 SNORD53B-201ENST00000577887 78 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 DEFB131E-202ENST00000602581 683 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 AL022154.1-201ENST00000604698 785 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 AP001485.1-201ENST00000604799 199 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 AL592221.1-201ENST00000605266 382 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.1□□□□□ -2.23
NKX6-2Q9C056 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 AC021755.4-201ENST00000616620 456 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 AP000484.1-201ENST00000620067 1252 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.1□□□□□ -2.23
NKX6-2Q9C056 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
NKX6-2Q9C056 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.1□□□□□ -2.23
NKX6-2Q9C056 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
NKX6-2Q9C056 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.1□□□□□ -2.23
NKX6-2Q9C056 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
NKX6-2Q9C056 RNU4-68P-201ENST00000364314 141 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 MIR29B2-201ENST00000385055 81 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 SNORA48.1-201ENST00000390879 135 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 SNORA11.1-201ENST00000408133 129 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 RNU6-757P-201ENST00000410334 100 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.09□□□□□ -2.23
NKX6-2Q9C056 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.09□□□□□ -2.23
NKX6-2Q9C056 AL513185.2-201ENST00000425543 193 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.09□□□□□ -2.23
NKX6-2Q9C056 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.09□□□□□ -2.23
NKX6-2Q9C056 AL627311.1-201ENST00000431514 115 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.09□□□□□ -2.23
NKX6-2Q9C056 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.09□□□□□ -2.23
NKX6-2Q9C056 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.09□□□□□ -2.23
NKX6-2Q9C056 PTENP1-201ENST00000447117 1215 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 RPL30P12-201ENST00000474666 353 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 RPL30P6-201ENST00000475925 342 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.09□□□□□ -2.23
NKX6-2Q9C056 AC008549.1-201ENST00000512900 643 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 AL356057.1-201ENST00000533798 831 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 AC018630.3-201ENST00000542637 96 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 CR383656.8-201ENST00000549046 145 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.09□□□□□ -2.23
NKX6-2Q9C056 SUB1P3-201ENST00000564581 315 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 MIR4307-201ENST00000582802 84 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 BNIP3P31-201ENST00000604515 566 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.09□□□□□ -2.23
NKX6-2Q9C056 MIR6798-201ENST00000612887 67 ntBASIC1.09□□□□□ -2.23
NKX6-2Q9C056 AC063943.3-201ENST00000615562 356 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms