Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 RNA5SP383-201ENST00000362934 120 ntBASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 RNU6-428P-201ENST00000362942 107 ntBASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 RPL23AP22-201ENST00000437556 453 ntBASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 AL513043.1-201ENST00000439124 535 ntBASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 DAP3P1-201ENST00000441522 278 ntBASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 AC013470.1-201ENST00000453438 462 ntBASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 RBMY2UP-201ENST00000453474 324 ntBASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 Y_RNA.653-201ENST00000459091 95 ntBASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 RPL9P9-202ENST00000466501 579 ntBASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 RN7SL542P-201ENST00000467147 294 ntBASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 AC025518.1-201ENST00000479856 347 ntBASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 SNORD59.2-201ENST00000516873 68 ntBASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 AC026403.1-201ENST00000518938 295 ntBASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 AC018462.2-201ENST00000605375 395 ntBASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 AC004944.1-201ENST00000517807 3059 ntBASIC3.32□□□□□ -1.88
TRIM54Q9BYV2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 KPNA2P1-201ENST00000458289 1591 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 RNU6-942P-201ENST00000363002 107 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 RNU6-1188P-201ENST00000363795 107 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 SNORA14A-201ENST00000364773 135 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 SNORD116-29-201ENST00000384516 83 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 SNORD116-20-201ENST00000384529 92 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 FTH1P15-201ENST00000406984 280 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 RNU6-1050P-201ENST00000410388 107 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 TRIAP1P1-201ENST00000427062 225 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 AL591043.1-201ENST00000432461 424 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 AL161651.1-201ENST00000440882 223 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 snoU13.22-201ENST00000459428 104 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 RPS27P29-201ENST00000463110 252 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 MRPL42P6-201ENST00000486397 371 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 AC114801.2-201ENST00000503825 781 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 SMURF2P1-201ENST00000514992 481 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 AC104027.1-201ENST00000521887 300 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 AC005476.1-201ENST00000554427 397 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 AC018889.1-201ENST00000605372 397 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 U3.45-201ENST00000607547 219 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 AL133215.3-201ENST00000609801 448 ntBASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
TRIM54Q9BYV2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 RNU4-35P-201ENST00000362588 141 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 RNU1-105P-201ENST00000363470 161 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 RNA5SP50-201ENST00000363731 107 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 RNU6-105P-201ENST00000363909 104 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 RNU6-1317P-201ENST00000364582 104 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 RNU6-336P-201ENST00000364891 107 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 Y_RNA.419-201ENST00000384041 102 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 SNORA75.4-201ENST00000391278 119 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 AL513475.1-201ENST00000406602 315 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 Y_RNA.594-201ENST00000410373 140 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 RNU2-49P-201ENST00000410666 184 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 RNU6-1245P-201ENST00000411130 106 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 RNU6-1304P-201ENST00000411374 106 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 AC023141.4-201ENST00000412031 328 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 AC017079.2-201ENST00000416102 485 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 SNORD5.1-201ENST00000458800 75 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 MTCYBP40-201ENST00000509390 1135 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 AC026782.1-201ENST00000512952 449 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 ACA59.1-201ENST00000515966 143 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 RNU6-1170P-201ENST00000515974 106 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 SNORA64.4-201ENST00000516632 81 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 SNORD19.2-201ENST00000516978 73 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 AP000654.2-201ENST00000605633 586 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 AC009229.3-201ENST00000608056 282 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 AL157817.1-201ENST00000614264 790 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 AC098657.3-201ENST00000620434 263 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 AC039056.2-201ENST00000622261 511 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 AC073476.4-201ENST00000628409 72 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 AL669831.3-213ENST00000636676 183 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 AC110774.1-201ENST00000623567 2018 ntBASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM54Q9BYV2 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM54Q9BYV2 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM54Q9BYV2 RNU6-1011P-201ENST00000384668 107 ntBASIC3.29□□□□□ -1.88
TRIM54Q9BYV2 MIR767-201ENST00000390228 109 ntBASIC3.29□□□□□ -1.88
TRIM54Q9BYV2 SNORD17-201ENST00000390930 237 ntBASIC3.29□□□□□ -1.88
TRIM54Q9BYV2 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM54Q9BYV2 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM54Q9BYV2 USP9YP30-201ENST00000430729 455 ntBASIC3.29□□□□□ -1.88
TRIM54Q9BYV2 AC236972.1-201ENST00000433225 199 ntBASIC3.29□□□□□ -1.88
TRIM54Q9BYV2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM54Q9BYV2 RPL30P15-201ENST00000457129 321 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms