Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 CYCSP49-201ENST00000420810 319 ntBASIC1.19□□□□□ -2.22
UPK3BQ9BT76 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.19□□□□□ -2.22
UPK3BQ9BT76 AC092648.1-201ENST00000425870 423 ntBASIC1.19□□□□□ -2.22
UPK3BQ9BT76 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.19□□□□□ -2.22
UPK3BQ9BT76 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.19□□□□□ -2.22
UPK3BQ9BT76 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.19□□□□□ -2.22
UPK3BQ9BT76 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.19□□□□□ -2.22
UPK3BQ9BT76 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.19□□□□□ -2.22
UPK3BQ9BT76 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.19□□□□□ -2.22
UPK3BQ9BT76 USP9YP17-201ENST00000444617 696 ntBASIC1.19□□□□□ -2.22
UPK3BQ9BT76 SSXP1-201ENST00000453640 473 ntBASIC1.19□□□□□ -2.22
UPK3BQ9BT76 PRELID3BP1-201ENST00000457142 540 ntBASIC1.19□□□□□ -2.22
UPK3BQ9BT76 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
UPK3BQ9BT76 RNU6-1003P-201ENST00000517099 105 ntBASIC1.19□□□□□ -2.22
UPK3BQ9BT76 AC105185.1-201ENST00000518705 535 ntBASIC1.19□□□□□ -2.22
UPK3BQ9BT76 AP004607.1-201ENST00000524456 203 ntBASIC1.19□□□□□ -2.22
UPK3BQ9BT76 AP003392.2-201ENST00000527269 208 ntBASIC1.19□□□□□ -2.22
UPK3BQ9BT76 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.19□□□□□ -2.22
UPK3BQ9BT76 CLIC4P2-201ENST00000601934 717 ntBASIC1.19□□□□□ -2.22
UPK3BQ9BT76 AL391813.2-201ENST00000609113 322 ntBASIC1.19□□□□□ -2.22
UPK3BQ9BT76 U6.42-201ENST00000618440 107 ntBASIC1.19□□□□□ -2.22
UPK3BQ9BT76 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.19□□□□□ -2.22
UPK3BQ9BT76 AC092192.1-201ENST00000633154 1018 ntBASIC1.19□□□□□ -2.22
UPK3BQ9BT76 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
UPK3BQ9BT76 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
UPK3BQ9BT76 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.18□□□□□ -2.22
UPK3BQ9BT76 MIR412-201ENST00000362142 91 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 RNU6-942P-201ENST00000363002 107 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 RNU6-1274P-201ENST00000384557 107 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 RNU6-1242P-201ENST00000391052 103 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 MIR1262-201ENST00000408276 93 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 MIR1283-2-201ENST00000408621 87 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 RNU2-48P-201ENST00000410694 191 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 RN7SKP51-201ENST00000410781 304 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.18□□□□□ -2.22
UPK3BQ9BT76 MTCO2P21-201ENST00000419780 677 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.18□□□□□ -2.22
UPK3BQ9BT76 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.18□□□□□ -2.22
UPK3BQ9BT76 EIF4EP2-201ENST00000422816 654 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 BX510359.4-201ENST00000423750 193 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 AL627311.1-201ENST00000431514 115 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 RPL23AP30-201ENST00000432419 501 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
UPK3BQ9BT76 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.18□□□□□ -2.22
UPK3BQ9BT76 MTATP6P14-201ENST00000455189 673 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 AC027575.1-201ENST00000481064 460 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 AC119751.4-201ENST00000507498 357 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 PTP4A1P4-201ENST00000512479 322 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.18□□□□□ -2.22
UPK3BQ9BT76 RNU6-201P-201ENST00000517100 61 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.18□□□□□ -2.22
UPK3BQ9BT76 AP005660.1-201ENST00000522972 293 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.18□□□□□ -2.22
UPK3BQ9BT76 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.18□□□□□ -2.22
UPK3BQ9BT76 MIR4419B-201ENST00000577260 68 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.18□□□□□ -2.22
UPK3BQ9BT76 BNIP3P40-201ENST00000596017 556 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.18□□□□□ -2.22
UPK3BQ9BT76 AC004908.3-201ENST00000610248 625 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 AC099842.1-201ENST00000619919 596 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 AC093648.1-201ENST00000623546 606 ntBASIC1.18□□□□□ -2.22
UPK3BQ9BT76 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.18□□□□□ -2.22
UPK3BQ9BT76 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.18□□□□□ -2.22
UPK3BQ9BT76 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
UPK3BQ9BT76 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
UPK3BQ9BT76 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
UPK3BQ9BT76 RNY4P16-201ENST00000364768 94 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 SNORD48-201ENST00000364953 64 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 RNA5SP190-201ENST00000365222 118 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 SNORD14D-201ENST00000384390 87 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 RPS20P2-201ENST00000402520 389 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.17□□□□□ -2.22
UPK3BQ9BT76 AL358453.1-201ENST00000422522 250 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 UBE2V1P4-201ENST00000425374 344 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 AL353777.1-201ENST00000425552 326 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 AL645568.3-201ENST00000433683 316 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.17□□□□□ -2.22
UPK3BQ9BT76 AL008629.1-201ENST00000438615 184 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 RPL22P17-201ENST00000438729 315 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 USP9YP15-201ENST00000442391 422 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.17□□□□□ -2.22
UPK3BQ9BT76 AL121594.1-201ENST00000475906 575 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 AC117532.1-201ENST00000514638 323 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 AC112206.4-201ENST00000515142 405 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 RN7SKP219-201ENST00000516825 296 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 AC022616.8-201ENST00000533569 253 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.17□□□□□ -2.22
UPK3BQ9BT76 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.17□□□□□ -2.22
UPK3BQ9BT76 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.17□□□□□ -2.22
UPK3BQ9BT76 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.17□□□□□ -2.22
UPK3BQ9BT76 MTCYBP33-201ENST00000575007 1130 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 MIR4285-201ENST00000581001 85 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 AC012065.4-201ENST00000602445 679 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 CYP2C61P-201ENST00000604072 290 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 RNU4-5P-201ENST00000607255 135 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 AL022345.1-201ENST00000607292 135 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 AC012360.2-201ENST00000609349 391 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 AC108747.1-201ENST00000609508 535 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 AL359547.2-201ENST00000615810 418 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 AL132822.1-201ENST00000617063 513 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms