Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC091979.2-201ENST00000607514 214 ntBASIC5.21□□□□□ -1.58
LRCH3Q96II8 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.21□□□□□ -1.58
LRCH3Q96II8 AL133383.2-201ENST00000622958 2336 ntBASIC5.21□□□□□ -1.58
LRCH3Q96II8 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.21□□□□□ -1.58
LRCH3Q96II8 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
LRCH3Q96II8 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
LRCH3Q96II8 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.21□□□□□ -1.58
LRCH3Q96II8 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
LRCH3Q96II8 AC022336.2-201ENST00000568966 2538 ntBASIC5.21□□□□□ -1.58
LRCH3Q96II8 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRCH3Q96II8 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRCH3Q96II8 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC5.21□□□□□ -1.58
LRCH3Q96II8 AL450326.2-201ENST00000421913 1962 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LRCH3Q96II8 RNU6-249P-201ENST00000363016 102 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 SNORD45.3-201ENST00000363836 72 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 Y_RNA.310-201ENST00000365063 113 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 Y_RNA.415-201ENST00000384012 112 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 RNU6-383P-201ENST00000410864 94 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.2□□□□□ -1.58
LRCH3Q96II8 RPL27AP8-201ENST00000424277 446 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 AC244670.1-201ENST00000436879 112 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 HSPE1P21-201ENST00000438283 308 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 AC006517.1-201ENST00000480485 328 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.2□□□□□ -1.58
LRCH3Q96II8 MLLT10P2-201ENST00000506434 249 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 AC098976.1-201ENST00000513014 541 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 RNU6-107P-201ENST00000516643 102 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 RNU6-703P-201ENST00000516946 107 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.2□□□□□ -1.58
LRCH3Q96II8 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.2□□□□□ -1.58
LRCH3Q96II8 MIR3921-201ENST00000577308 85 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 MIR378D2-201ENST00000580636 98 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 AC091178.2-201ENST00000584401 117 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 AP001318.4-201ENST00000616637 121 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 AC015726.2-201ENST00000620112 122 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 MIR492-201ENST00000638676 116 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 AP005432.1-201ENST00000580891 3485 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.2□□□□□ -1.58
LRCH3Q96II8 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.2□□□□□ -1.58
LRCH3Q96II8 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
LRCH3Q96II8 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRCH3Q96II8 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.2□□□□□ -1.58
LRCH3Q96II8 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRCH3Q96II8 AC083843.2-201ENST00000568248 6253 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRCH3Q96II8 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRCH3Q96II8 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRCH3Q96II8 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRCH3Q96II8 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRCH3Q96II8 AL450345.1-202ENST00000605741 3881 ntBASIC5.2□□□□□ -1.58
LRCH3Q96II8 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.2□□□□□ -1.58
LRCH3Q96II8 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRCH3Q96II8 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRCH3Q96II8 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
LRCH3Q96II8 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRCH3Q96II8 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRCH3Q96II8 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.19□□□□□ -1.58
LRCH3Q96II8 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LRCH3Q96II8 Y_RNA.111-201ENST00000363248 100 ntBASIC5.19□□□□□ -1.58
LRCH3Q96II8 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LRCH3Q96II8 RNU6-356P-201ENST00000384140 107 ntBASIC5.19□□□□□ -1.58
LRCH3Q96II8 Y_RNA.456-201ENST00000384232 111 ntBASIC5.19□□□□□ -1.58
LRCH3Q96II8 MIRLET7F2-201ENST00000385277 83 ntBASIC5.19□□□□□ -1.58
LRCH3Q96II8 SNORA48.4-201ENST00000391089 134 ntBASIC5.19□□□□□ -1.58
LRCH3Q96II8 SNORA26.3-201ENST00000391119 136 ntBASIC5.19□□□□□ -1.58
LRCH3Q96II8 U6atac.2-201ENST00000408644 118 ntBASIC5.19□□□□□ -1.58
LRCH3Q96II8 Y_RNA.622-201ENST00000411091 108 ntBASIC5.19□□□□□ -1.58
LRCH3Q96II8 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.19□□□□□ -1.58
LRCH3Q96II8 AC093578.1-201ENST00000415219 368 ntBASIC5.19□□□□□ -1.58
LRCH3Q96II8 SCARNA10-201ENST00000459255 330 ntBASIC5.19□□□□□ -1.58
LRCH3Q96II8 AP003730.1-201ENST00000524605 285 ntBASIC5.19□□□□□ -1.58
LRCH3Q96II8 AC022726.1-201ENST00000587475 207 ntBASIC5.19□□□□□ -1.58
LRCH3Q96II8 AC136601.2-201ENST00000604356 474 ntBASIC5.19□□□□□ -1.58
LRCH3Q96II8 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC5.19□□□□□ -1.58
LRCH3Q96II8 AC073073.2-201ENST00000609827 2578 ntBASIC5.19□□□□□ -1.58
LRCH3Q96II8 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
LRCH3Q96II8 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.19□□□□□ -1.58
LRCH3Q96II8 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.19□□□□□ -1.58
LRCH3Q96II8 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.19□□□□□ -1.58
LRCH3Q96II8 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.19□□□□□ -1.58
LRCH3Q96II8 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
LRCH3Q96II8 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRCH3Q96II8 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
LRCH3Q96II8 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LRCH3Q96II8 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
LRCH3Q96II8 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LRCH3Q96II8 SNORA2.3-201ENST00000383920 135 ntBASIC5.18□□□□□ -1.58
LRCH3Q96II8 SNORA18.3-201ENST00000384122 132 ntBASIC5.18□□□□□ -1.58
LRCH3Q96II8 RNY3P5-201ENST00000384127 102 ntBASIC5.18□□□□□ -1.58
LRCH3Q96II8 MIR200C-201ENST00000384980 68 ntBASIC5.18□□□□□ -1.58
LRCH3Q96II8 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRCH3Q96II8 AL356387.2-201ENST00000422272 243 ntBASIC5.18□□□□□ -1.58
LRCH3Q96II8 RPS29P9-201ENST00000440360 171 ntBASIC5.18□□□□□ -1.58
LRCH3Q96II8 HMGN2P32-201ENST00000444648 269 ntBASIC5.18□□□□□ -1.58
LRCH3Q96II8 RPL31P41-201ENST00000477967 372 ntBASIC5.18□□□□□ -1.58
LRCH3Q96II8 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.18□□□□□ -1.58
LRCH3Q96II8 RN7SKP19-201ENST00000516016 252 ntBASIC5.18□□□□□ -1.58
LRCH3Q96II8 AC093331.1-201ENST00000521474 169 ntBASIC5.18□□□□□ -1.58
LRCH3Q96II8 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms