Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HPS1Q92902 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HPS1Q92902 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HPS1Q92902 SCARNA15-201ENST00000607520 4325 ntBASIC4.66□□□□□ -1.66
HPS1Q92902 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HPS1Q92902 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HPS1Q92902 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HPS1Q92902 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HPS1Q92902 RNU6-1107P-201ENST00000364817 104 ntBASIC4.66□□□□□ -1.66
HPS1Q92902 RNU6-1336P-201ENST00000383886 109 ntBASIC4.66□□□□□ -1.66
HPS1Q92902 RNU6-756P-201ENST00000383997 107 ntBASIC4.66□□□□□ -1.66
HPS1Q92902 RNU6-136P-201ENST00000384663 107 ntBASIC4.66□□□□□ -1.66
HPS1Q92902 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.66□□□□□ -1.66
HPS1Q92902 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.66□□□□□ -1.66
HPS1Q92902 AC244670.1-201ENST00000436879 112 ntBASIC4.66□□□□□ -1.66
HPS1Q92902 RN7SL727P-201ENST00000482164 296 ntBASIC4.66□□□□□ -1.66
HPS1Q92902 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.66□□□□□ -1.66
HPS1Q92902 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.66□□□□□ -1.66
HPS1Q92902 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HPS1Q92902 RPL30P11-203ENST00000598995 310 ntBASIC4.66□□□□□ -1.66
HPS1Q92902 SNX18P1Y-201ENST00000616231 511 ntBASIC4.66□□□□□ -1.66
HPS1Q92902 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.66□□□□□ -1.66
HPS1Q92902 MIR6839-201ENST00000620425 113 ntBASIC4.66□□□□□ -1.66
HPS1Q92902 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.66□□□□□ -1.66
HPS1Q92902 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.66□□□□□ -1.66
HPS1Q92902 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HPS1Q92902 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.66□□□□□ -1.66
HPS1Q92902 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HPS1Q92902 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HPS1Q92902 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HPS1Q92902 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HPS1Q92902 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HPS1Q92902 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
HPS1Q92902 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HPS1Q92902 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
HPS1Q92902 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HPS1Q92902 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.65□□□□□ -1.66
HPS1Q92902 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.65□□□□□ -1.66
HPS1Q92902 SNORA58B-201ENST00000364259 136 ntBASIC4.65□□□□□ -1.67
HPS1Q92902 RNU6-171P-201ENST00000384354 107 ntBASIC4.65□□□□□ -1.67
HPS1Q92902 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HPS1Q92902 MIR320B2-201ENST00000408479 138 ntBASIC4.65□□□□□ -1.67
HPS1Q92902 RNA5SP146-201ENST00000410743 123 ntBASIC4.65□□□□□ -1.67
HPS1Q92902 AC007161.1-204ENST00000423039 460 ntBASIC4.65□□□□□ -1.67
HPS1Q92902 AL139148.1-201ENST00000427122 680 ntBASIC4.65□□□□□ -1.67
HPS1Q92902 CKS1BP5-201ENST00000434172 273 ntBASIC4.65□□□□□ -1.67
HPS1Q92902 TDGF1P1-201ENST00000445734 527 ntBASIC4.65□□□□□ -1.67
HPS1Q92902 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.65□□□□□ -1.67
HPS1Q92902 SNRPGP8-201ENST00000454064 226 ntBASIC4.65□□□□□ -1.67
HPS1Q92902 AC108751.2-201ENST00000469993 231 ntBASIC4.65□□□□□ -1.67
HPS1Q92902 AC231760.1-201ENST00000498002 260 ntBASIC4.65□□□□□ -1.67
HPS1Q92902 SNORA40.13-201ENST00000516379 120 ntBASIC4.65□□□□□ -1.67
HPS1Q92902 AC131055.1-201ENST00000584626 316 ntBASIC4.65□□□□□ -1.67
HPS1Q92902 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.65□□□□□ -1.67
HPS1Q92902 AL031274.2-201ENST00000599419 203 ntBASIC4.65□□□□□ -1.67
HPS1Q92902 AC025946.2-201ENST00000603398 234 ntBASIC4.65□□□□□ -1.67
HPS1Q92902 AC090132.2-201ENST00000615881 347 ntBASIC4.65□□□□□ -1.67
HPS1Q92902 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.65□□□□□ -1.67
HPS1Q92902 AL023881.1-201ENST00000621088 301 ntBASIC4.65□□□□□ -1.67
HPS1Q92902 AC074101.1-201ENST00000637861 241 ntBASIC4.65□□□□□ -1.67
HPS1Q92902 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HPS1Q92902 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.65□□□□□ -1.67
HPS1Q92902 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.65□□□□□ -1.67
HPS1Q92902 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.65□□□□□ -1.67
HPS1Q92902 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HPS1Q92902 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HPS1Q92902 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HPS1Q92902 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HPS1Q92902 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HPS1Q92902 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
HPS1Q92902 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HPS1Q92902 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HPS1Q92902 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.64□□□□□ -1.67
HPS1Q92902 MIR937-201ENST00000401271 86 ntBASIC4.64□□□□□ -1.67
HPS1Q92902 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.64□□□□□ -1.67
HPS1Q92902 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.64□□□□□ -1.67
HPS1Q92902 RN7SL329P-201ENST00000467740 299 ntBASIC4.64□□□□□ -1.67
HPS1Q92902 RPS23P1-201ENST00000491662 432 ntBASIC4.64□□□□□ -1.67
HPS1Q92902 RNU5F-2P-201ENST00000516066 82 ntBASIC4.64□□□□□ -1.67
HPS1Q92902 RNA5SP249-201ENST00000516127 99 ntBASIC4.64□□□□□ -1.67
HPS1Q92902 RN7SKP12-201ENST00000516275 143 ntBASIC4.64□□□□□ -1.67
HPS1Q92902 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.64□□□□□ -1.67
HPS1Q92902 AC020895.1-201ENST00000595362 272 ntBASIC4.64□□□□□ -1.67
HPS1Q92902 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HPS1Q92902 AC136601.2-201ENST00000604356 474 ntBASIC4.64□□□□□ -1.67
HPS1Q92902 MTND5P18-201ENST00000445624 1801 ntBASIC4.64□□□□□ -1.67
HPS1Q92902 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HPS1Q92902 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HPS1Q92902 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.64□□□□□ -1.67
HPS1Q92902 TLK1P1-201ENST00000456760 2440 ntBASIC4.64□□□□□ -1.67
HPS1Q92902 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HPS1Q92902 MARK2P15-201ENST00000432204 2186 ntBASIC4.64□□□□□ -1.67
HPS1Q92902 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HPS1Q92902 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HPS1Q92902 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HPS1Q92902 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.63□□□□□ -1.67
HPS1Q92902 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
HPS1Q92902 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HPS1Q92902 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.63□□□□□ -1.67
HPS1Q92902 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms