Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 TRAV32-201ENST00000553993 340 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 H3F3AP1-201ENST00000559984 334 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 MIR4782-201ENST00000577987 79 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 MIR2682-201ENST00000580305 110 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 AL591516.1-201ENST00000611326 274 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 AL161629.2-201ENST00000615347 275 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 AC092608.2-201ENST00000624427 218 ntBASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ATG4AQ8WYN0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 CUL1P1-201ENST00000509510 2425 ntBASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 PTMAP5-201ENST00000393073 333 ntBASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 RNU6-325P-201ENST00000411132 105 ntBASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 PMCHL1-202ENST00000423102 261 ntBASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 HMGN2P30-201ENST00000423237 256 ntBASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 MTATP6P7-201ENST00000453315 681 ntBASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 RNU6-1037P-201ENST00000459571 107 ntBASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 RN7SL75P-201ENST00000461926 281 ntBASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 PHBP14-201ENST00000512887 367 ntBASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 RNU1-103P-201ENST00000516502 125 ntBASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 HIGD1AP1-201ENST00000550979 275 ntBASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 MTCO3P13-201ENST00000577757 781 ntBASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 AC006504.6-201ENST00000590142 199 ntBASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 AL360085.1-201ENST00000604713 532 ntBASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 U3.45-201ENST00000607547 219 ntBASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 uc_338.25-201ENST00000613756 156 ntBASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 PLCE1P1-201ENST00000622094 305 ntBASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.3□□□□□ -1.88
ATG4AQ8WYN0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 Y_RNA.31-201ENST00000362574 102 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 RNU6-778P-201ENST00000363269 103 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 SNORA33.2-201ENST00000365413 134 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 RNU6-827P-201ENST00000365553 106 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 Y_RNA.422-201ENST00000384054 114 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 RNU6-842P-201ENST00000384269 107 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 RNU6-1035P-201ENST00000384477 107 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 MIR888-201ENST00000401186 77 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 AL591034.1-201ENST00000407447 340 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 AL117339.3-201ENST00000418733 162 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 MTND2P23-201ENST00000422990 651 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 RPS15AP10-201ENST00000432472 382 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 RNA5SP310-201ENST00000459084 116 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 AC034236.1-201ENST00000469891 373 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 PTP4A1P4-201ENST00000512479 322 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 Y_RNA.687-201ENST00000516558 91 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 RNU6-307P-201ENST00000516743 106 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 RNU6-1183P-201ENST00000517054 60 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 AC109479.2-201ENST00000517842 174 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 SYF2P1-201ENST00000550658 413 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 CYCSP39-201ENST00000565821 309 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 AMZ2P1-203ENST00000565833 850 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 AC109446.1-201ENST00000566172 220 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 AC012531.5-201ENST00000611375 151 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 AC011890.2-201ENST00000613393 294 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 AC040896.1-201ENST00000613819 479 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 AC138627.2-201ENST00000624202 601 ntBASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATG4AQ8WYN0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 Y_RNA.2-201ENST00000362330 96 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 SNORA22B-201ENST00000383876 138 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 RNU1-73P-201ENST00000383971 164 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 RNU6-72P-201ENST00000384285 79 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 RNU6-933P-201ENST00000384424 107 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 RNU6-790P-201ENST00000384479 105 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 RNU6-658P-201ENST00000384606 106 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 SNORA46-201ENST00000384762 135 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 MIR606-201ENST00000384851 96 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 RNU6-308P-201ENST00000390957 107 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 RPL21P3-201ENST00000395517 478 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 FTH1P25-201ENST00000447665 469 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 RPL37P4-201ENST00000448908 268 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms