Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 U3.37-201ENST00000408528 213 ntBASIC1.65□□□□□ -2.15
LINC01560Q8TB33 U6atac.2-201ENST00000408644 118 ntBASIC1.65□□□□□ -2.15
LINC01560Q8TB33 Y_RNA.623-201ENST00000411128 95 ntBASIC1.65□□□□□ -2.15
LINC01560Q8TB33 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC01560Q8TB33 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.65□□□□□ -2.15
LINC01560Q8TB33 AL365338.1-201ENST00000422282 858 ntBASIC1.65□□□□□ -2.15
LINC01560Q8TB33 CALM2P2-201ENST00000428512 440 ntBASIC1.65□□□□□ -2.15
LINC01560Q8TB33 AC108667.1-201ENST00000428618 249 ntBASIC1.65□□□□□ -2.15
LINC01560Q8TB33 AC073614.1-201ENST00000438690 650 ntBASIC1.65□□□□□ -2.15
LINC01560Q8TB33 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.65□□□□□ -2.15
LINC01560Q8TB33 AL033528.1-201ENST00000453780 140 ntBASIC1.65□□□□□ -2.15
LINC01560Q8TB33 AC080013.2-201ENST00000460866 323 ntBASIC1.65□□□□□ -2.15
LINC01560Q8TB33 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.65□□□□□ -2.15
LINC01560Q8TB33 SMURF2P1-201ENST00000514992 481 ntBASIC1.65□□□□□ -2.15
LINC01560Q8TB33 RNU1-104P-201ENST00000517280 175 ntBASIC1.65□□□□□ -2.15
LINC01560Q8TB33 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC01560Q8TB33 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.65□□□□□ -2.15
LINC01560Q8TB33 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC01560Q8TB33 PRELID2P1-201ENST00000552837 301 ntBASIC1.65□□□□□ -2.15
LINC01560Q8TB33 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC01560Q8TB33 AC023043.2-201ENST00000589678 1026 ntBASIC1.65□□□□□ -2.15
LINC01560Q8TB33 AC002984.1-201ENST00000591692 448 ntBASIC1.65□□□□□ -2.15
LINC01560Q8TB33 AC009314.1-201ENST00000603871 304 ntBASIC1.65□□□□□ -2.15
LINC01560Q8TB33 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.65□□□□□ -2.15
LINC01560Q8TB33 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.65□□□□□ -2.15
LINC01560Q8TB33 AC093648.1-201ENST00000623546 606 ntBASIC1.65□□□□□ -2.15
LINC01560Q8TB33 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.65□□□□□ -2.15
LINC01560Q8TB33 AC019226.2-201ENST00000625973 424 ntBASIC1.65□□□□□ -2.15
LINC01560Q8TB33 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.65□□□□□ -2.15
LINC01560Q8TB33 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LINC01560Q8TB33 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
LINC01560Q8TB33 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LINC01560Q8TB33 HSPA8P4-201ENST00000511877 1920 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 ZNF720P1-201ENST00000562403 1939 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
LINC01560Q8TB33 Z75746.1-201ENST00000440243 2080 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 FGF7P2-201ENST00000332473 296 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 RNU1-72P-201ENST00000362976 153 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 RNU6-486P-201ENST00000363116 107 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 U3.4-201ENST00000363352 213 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LINC01560Q8TB33 RNY3P10-201ENST00000384764 102 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 SNORA17.3-201ENST00000391159 129 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 RNU6-248P-201ENST00000410720 107 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 EEF1A1P40-201ENST00000412883 573 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC01560Q8TB33 CYCSP48-201ENST00000417124 323 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 AC009518.2-201ENST00000418056 731 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC01560Q8TB33 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.64□□□□□ -2.15
LINC01560Q8TB33 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.64□□□□□ -2.15
LINC01560Q8TB33 AL021397.1-201ENST00000451806 248 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 RPS27AP8-201ENST00000452665 445 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC01560Q8TB33 snoU109.2-201ENST00000459316 135 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 SNORD42A-201ENST00000459584 64 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 AC112771.1-201ENST00000463581 102 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 KLF3P2-201ENST00000465138 268 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 RPL7P43-201ENST00000478876 753 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 RPL36AP48-201ENST00000485521 314 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 MRPL42P6-201ENST00000486397 371 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.64□□□□□ -2.15
LINC01560Q8TB33 RNA5SP112-201ENST00000515937 99 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 SNORA25.15-201ENST00000516487 89 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.64□□□□□ -2.15
LINC01560Q8TB33 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.64□□□□□ -2.15
LINC01560Q8TB33 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC01560Q8TB33 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.64□□□□□ -2.15
LINC01560Q8TB33 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC01560Q8TB33 MIR548AC-201ENST00000585049 88 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC01560Q8TB33 CLIC4P2-201ENST00000601934 717 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 Z94722.1-201ENST00000604328 474 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 AL670379.10-201ENST00000604330 253 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 AL670379.9-201ENST00000605428 253 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 AC068276.1-201ENST00000605793 379 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 AC087045.1-201ENST00000605856 382 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC01560Q8TB33 AP001506.1-201ENST00000615444 211 ntBASIC1.64□□□□□ -2.15
LINC01560Q8TB33 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LINC01560Q8TB33 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LINC01560Q8TB33 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
LINC01560Q8TB33 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
LINC01560Q8TB33 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
LINC01560Q8TB33 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
LINC01560Q8TB33 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AC005336.3-201ENST00000623833 2679 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.63□□□□□ -2.15
LINC01560Q8TB33 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LINC01560Q8TB33 MIR412-201ENST00000362142 91 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 RNU6-942P-201ENST00000363002 107 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 SNORD14B-201ENST00000364533 90 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 RNU6-384P-201ENST00000364900 104 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 RNA5SP190-201ENST00000365222 118 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
LINC01560Q8TB33 RPL23AP36-201ENST00000413895 458 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 MTND1P23-201ENST00000416931 372 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 MTND3P17-201ENST00000416968 344 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AC097463.2-201ENST00000421074 142 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 RPS3AP44-201ENST00000425466 790 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms