Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.75□□□□□ -1.65
SNIP1Q8TAD8 AL133383.2-201ENST00000622958 2336 ntBASIC4.75□□□□□ -1.65
SNIP1Q8TAD8 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNIP1Q8TAD8 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNIP1Q8TAD8 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
SNIP1Q8TAD8 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNIP1Q8TAD8 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 AC092268.1-201ENST00000342691 405 ntBASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 RNU1-62P-201ENST00000362599 164 ntBASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 Y_RNA.310-201ENST00000365063 113 ntBASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 Y_RNA.346-201ENST00000365385 112 ntBASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 Y_RNA.456-201ENST00000384232 111 ntBASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 RNU6-383P-201ENST00000410864 94 ntBASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 Y_RNA.622-201ENST00000411091 108 ntBASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 SNRPEP9-201ENST00000436794 238 ntBASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 MLLT10P2-201ENST00000506434 249 ntBASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 RN7SKP19-201ENST00000516016 252 ntBASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 Y_RNA.685-201ENST00000516532 108 ntBASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 AP001880.2-201ENST00000538233 448 ntBASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNIP1Q8TAD8 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 AC083899.1-201ENST00000454465 3819 ntBASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 AL450326.2-201ENST00000421913 1962 ntBASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 SNORD45.3-201ENST00000363836 72 ntBASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 RNU6-647P-201ENST00000364243 107 ntBASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 RNU6-144P-201ENST00000383951 107 ntBASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 Y_RNA.415-201ENST00000384012 112 ntBASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 RNY3P5-201ENST00000384127 102 ntBASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 RNU6-356P-201ENST00000384140 107 ntBASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 SNORA70F-201ENST00000384142 135 ntBASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 MIR129-1-201ENST00000384972 72 ntBASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 AC244670.1-201ENST00000436879 112 ntBASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 RN7SL443P-201ENST00000464331 290 ntBASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 RN7SL41P-201ENST00000476144 297 ntBASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 RNU6-703P-201ENST00000516946 107 ntBASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 RNA5SP291-201ENST00000517222 105 ntBASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 AC093331.1-201ENST00000521474 169 ntBASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 AP005432.2-201ENST00000608162 586 ntBASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 AC090132.2-201ENST00000615881 347 ntBASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 AC022336.2-201ENST00000568966 2538 ntBASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SNIP1Q8TAD8 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.72□□□□□ -1.65
SNIP1Q8TAD8 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNIP1Q8TAD8 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNIP1Q8TAD8 SNORA57.1-201ENST00000391227 145 ntBASIC4.72□□□□□ -1.65
SNIP1Q8TAD8 RPL23AP1-201ENST00000428990 471 ntBASIC4.72□□□□□ -1.65
SNIP1Q8TAD8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.72□□□□□ -1.65
SNIP1Q8TAD8 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.72□□□□□ -1.65
SNIP1Q8TAD8 AC091178.2-201ENST00000584401 117 ntBASIC4.72□□□□□ -1.65
SNIP1Q8TAD8 RPL30P11-203ENST00000598995 310 ntBASIC4.72□□□□□ -1.65
SNIP1Q8TAD8 AC025166.1-201ENST00000612411 163 ntBASIC4.72□□□□□ -1.65
SNIP1Q8TAD8 MIR6716-201ENST00000613413 80 ntBASIC4.72□□□□□ -1.65
SNIP1Q8TAD8 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SNIP1Q8TAD8 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNIP1Q8TAD8 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNIP1Q8TAD8 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SNIP1Q8TAD8 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.72□□□□□ -1.65
SNIP1Q8TAD8 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNIP1Q8TAD8 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SNIP1Q8TAD8 AC139713.2-214ENST00000642059 1811 ntBASIC4.72□□□□□ -1.65
SNIP1Q8TAD8 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.71□□□□□ -1.65
SNIP1Q8TAD8 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.71□□□□□ -1.65
SNIP1Q8TAD8 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
SNIP1Q8TAD8 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SNIP1Q8TAD8 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms