Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 snoU13.30-201ENST00000458951 104 ntBASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 snoU109.4-201ENST00000458953 143 ntBASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 RNU7-107P-201ENST00000459121 61 ntBASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 AC117440.1-201ENST00000474107 571 ntBASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 FTH1P24-201ENST00000503502 462 ntBASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 AC005046.1-201ENST00000608515 625 ntBASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 AL450472.3-201ENST00000615578 367 ntBASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 AL079305.1-201ENST00000623159 3008 ntBASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 RNU6-899P-201ENST00000363947 107 ntBASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 RNU6-879P-201ENST00000364328 108 ntBASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 RNU6-741P-201ENST00000383889 107 ntBASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 RNU6-17P-201ENST00000384245 107 ntBASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 RNU6-18P-201ENST00000384527 107 ntBASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 RPL31P2-201ENST00000413849 377 ntBASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 RPS12P23-201ENST00000419579 400 ntBASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 AL451062.2-201ENST00000427515 271 ntBASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 AC103783.1-201ENST00000520506 373 ntBASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 IFITM8P-201ENST00000522529 394 ntBASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 OR4H12P-201ENST00000556269 907 ntBASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 AC106785.1-201ENST00000565935 262 ntBASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 MIR4716-201ENST00000579628 84 ntBASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 MIR6868-201ENST00000611215 58 ntBASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 MIR6875-201ENST00000617506 72 ntBASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 MIR7154-201ENST00000620673 73 ntBASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NEDD1Q8NHV4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
NEDD1Q8NHV4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
NEDD1Q8NHV4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
NEDD1Q8NHV4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.77□□□□□ -1.65
NEDD1Q8NHV4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NEDD1Q8NHV4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.77□□□□□ -1.65
NEDD1Q8NHV4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NEDD1Q8NHV4 RNU6-227P-201ENST00000362865 103 ntBASIC4.77□□□□□ -1.65
NEDD1Q8NHV4 RNU6-428P-201ENST00000362942 107 ntBASIC4.77□□□□□ -1.65
NEDD1Q8NHV4 PPP1R11P2-201ENST00000423543 382 ntBASIC4.77□□□□□ -1.65
NEDD1Q8NHV4 RPL23AP58-201ENST00000440453 469 ntBASIC4.77□□□□□ -1.65
NEDD1Q8NHV4 RPL29P14-201ENST00000495837 428 ntBASIC4.77□□□□□ -1.65
NEDD1Q8NHV4 AC006499.6-201ENST00000511169 607 ntBASIC4.77□□□□□ -1.65
NEDD1Q8NHV4 RN7SKP272-201ENST00000516988 232 ntBASIC4.77□□□□□ -1.65
NEDD1Q8NHV4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.77□□□□□ -1.65
NEDD1Q8NHV4 AC025627.2-201ENST00000576220 160 ntBASIC4.77□□□□□ -1.65
NEDD1Q8NHV4 AC053481.4-201ENST00000583164 216 ntBASIC4.77□□□□□ -1.65
NEDD1Q8NHV4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NEDD1Q8NHV4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.77□□□□□ -1.65
NEDD1Q8NHV4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NEDD1Q8NHV4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 Y_RNA.172-201ENST00000363765 102 ntBASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 RNU6-339P-201ENST00000384310 107 ntBASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 RPL17P36-201ENST00000420302 549 ntBASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 WARS2P1-201ENST00000429678 537 ntBASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 AL592045.1-201ENST00000429867 352 ntBASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 AC090774.1-201ENST00000435925 246 ntBASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 AL357134.1-201ENST00000445848 426 ntBASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 AC074290.1-201ENST00000448883 135 ntBASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 RPS26P28-201ENST00000470806 348 ntBASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 RNU6-966P-201ENST00000516479 104 ntBASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 IGKV2D-36-201ENST00000518643 226 ntBASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 AC022616.8-201ENST00000533569 253 ntBASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 MIR4286-201ENST00000580651 93 ntBASIC4.76□□□□□ -1.65
NEDD1Q8NHV4 DNAJC19P2-201ENST00000593340 302 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms