Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 AL133383.2-201ENST00000622958 2336 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 FTLP6-201ENST00000355274 422 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 RNU6-428P-201ENST00000362942 107 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 RNY1P16-201ENST00000363063 111 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 Y_RNA.106-201ENST00000363189 100 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 RNU6-450P-201ENST00000364654 107 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 RNU4-42P-201ENST00000364738 142 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 RNA5SP189-201ENST00000364920 115 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 SET-203ENST00000372688 801 ntTSL 2 BASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 RNU6-505P-201ENST00000384427 107 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 Y_RNA.533-201ENST00000384596 114 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 AC017079.2-201ENST00000416102 485 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 NUP35P1-201ENST00000422734 947 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 AC007560.1-201ENST00000426912 237 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 AL445584.1-201ENST00000431451 330 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 RPS29P27-201ENST00000463711 170 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 AC010655.3-201ENST00000478818 450 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 RPL21P129-201ENST00000491732 478 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 RPL30P5-201ENST00000494923 336 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 Y_RNA.687-201ENST00000516558 91 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 RN7SKP289-201ENST00000517244 295 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 CYCSP39-201ENST00000565821 309 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 ZNF192P1-203ENST00000565888 810 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 MIR5696-201ENST00000578474 85 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 MIR5701-3-201ENST00000578890 82 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 MIR5701-1-201ENST00000585138 82 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 VN1R107P-201ENST00000601784 209 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 AC006077.1-201ENST00000604746 343 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 MIR5701-2-201ENST00000615634 82 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 AP003355.3-201ENST00000623465 114 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 AC008669.1-201ENST00000565823 2178 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 AC118273.1-201ENST00000525324 3006 ntBASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PNLDC1Q8NA58 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 Y_RNA.39-201ENST00000362620 98 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 SNORD50.1-201ENST00000362987 71 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 Y_RNA.149-201ENST00000363558 117 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 U3.6-201ENST00000363622 211 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 RNA5SP42-201ENST00000364278 115 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 AL359837.1-201ENST00000381357 287 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 RNU6-217P-201ENST00000384164 104 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 RNU6-140P-201ENST00000384566 108 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 SNORA48.7-201ENST00000391302 135 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 U3.39-201ENST00000408569 239 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 RNU6-1156P-201ENST00000410365 100 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 RPS15AP10-201ENST00000432472 382 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 SNORA84-201ENST00000459229 133 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 RPL23AP67-201ENST00000465341 474 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 AP002884.2-201ENST00000471647 395 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 RPS4XP22-201ENST00000480755 780 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 AC023141.12-201ENST00000512399 199 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 SCARNA14-201ENST00000516903 136 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 OR5D17P-201ENST00000531492 978 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 AC011602.1-201ENST00000546484 331 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 AC004817.2-201ENST00000561794 651 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 MIR4273-201ENST00000582824 84 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 AC006006.1-201ENST00000603082 144 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 SRGNP1-201ENST00000603392 451 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 PRR13P7-201ENST00000605538 430 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 AC090617.7-201ENST00000623952 126 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 SNORA50A-202ENST00000629536 136 ntBASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PNLDC1Q8NA58 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.09□□□□□ -1.91
PNLDC1Q8NA58 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PNLDC1Q8NA58 RNY3P11-201ENST00000364153 102 ntBASIC3.09□□□□□ -1.91
PNLDC1Q8NA58 Y_RNA.314-201ENST00000365114 102 ntBASIC3.09□□□□□ -1.91
PNLDC1Q8NA58 Y_RNA.389-201ENST00000383924 113 ntBASIC3.09□□□□□ -1.91
PNLDC1Q8NA58 RNU6-72P-201ENST00000384285 79 ntBASIC3.09□□□□□ -1.91
PNLDC1Q8NA58 RNU6-933P-201ENST00000384424 107 ntBASIC3.09□□□□□ -1.91
PNLDC1Q8NA58 Y_RNA.574-201ENST00000384766 95 ntBASIC3.09□□□□□ -1.91
PNLDC1Q8NA58 RNA5SP293-201ENST00000410527 113 ntBASIC3.09□□□□□ -1.91
PNLDC1Q8NA58 RNA5SP31-201ENST00000411144 127 ntBASIC3.09□□□□□ -1.91
PNLDC1Q8NA58 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.09□□□□□ -1.91
PNLDC1Q8NA58 AL731563.1-201ENST00000442202 214 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms