Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC007395.1-201ENST00000451333 677 ntBASIC4.66□□□□□ -1.66
SIX5Q8N196 snoU13.6-201ENST00000458785 104 ntBASIC4.66□□□□□ -1.66
SIX5Q8N196 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.66□□□□□ -1.66
SIX5Q8N196 SNORA31.23-201ENST00000517219 133 ntBASIC4.66□□□□□ -1.66
SIX5Q8N196 AL391261.3-201ENST00000557194 520 ntBASIC4.66□□□□□ -1.66
SIX5Q8N196 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.66□□□□□ -1.66
SIX5Q8N196 MIR3690-201ENST00000580266 75 ntBASIC4.66□□□□□ -1.66
SIX5Q8N196 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SIX5Q8N196 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.66□□□□□ -1.66
SIX5Q8N196 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SIX5Q8N196 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.66□□□□□ -1.66
SIX5Q8N196 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SIX5Q8N196 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SIX5Q8N196 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SIX5Q8N196 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
SIX5Q8N196 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
SIX5Q8N196 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SIX5Q8N196 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.65□□□□□ -1.66
SIX5Q8N196 AC006971.1-201ENST00000407916 4486 ntBASIC4.65□□□□□ -1.66
SIX5Q8N196 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SIX5Q8N196 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
SIX5Q8N196 RNU1-132P-201ENST00000364300 164 ntBASIC4.65□□□□□ -1.67
SIX5Q8N196 SNORA72.2-201ENST00000365028 127 ntBASIC4.65□□□□□ -1.67
SIX5Q8N196 RNU6-1145P-201ENST00000384246 107 ntBASIC4.65□□□□□ -1.67
SIX5Q8N196 MIR487A-201ENST00000385009 80 ntBASIC4.65□□□□□ -1.67
SIX5Q8N196 SDHCP2-201ENST00000398565 501 ntBASIC4.65□□□□□ -1.67
SIX5Q8N196 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.65□□□□□ -1.67
SIX5Q8N196 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.65□□□□□ -1.67
SIX5Q8N196 RPL23AP81-201ENST00000455252 467 ntBASIC4.65□□□□□ -1.67
SIX5Q8N196 AC091959.1-201ENST00000495857 238 ntBASIC4.65□□□□□ -1.67
SIX5Q8N196 RNU6-1278P-201ENST00000516130 107 ntBASIC4.65□□□□□ -1.67
SIX5Q8N196 RNU6-928P-201ENST00000516876 104 ntBASIC4.65□□□□□ -1.67
SIX5Q8N196 CKS1BP7-201ENST00000522230 235 ntBASIC4.65□□□□□ -1.67
SIX5Q8N196 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.65□□□□□ -1.67
SIX5Q8N196 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.65□□□□□ -1.67
SIX5Q8N196 AC135776.4-201ENST00000624300 1904 ntBASIC4.65□□□□□ -1.67
SIX5Q8N196 MFSD8-242ENST00000641690 4199 ntBASIC4.65□□□□□ -1.67
SIX5Q8N196 AC139713.2-215ENST00000641428 5037 ntBASIC4.65□□□□□ -1.67
SIX5Q8N196 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SIX5Q8N196 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SIX5Q8N196 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SIX5Q8N196 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SIX5Q8N196 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SIX5Q8N196 AC011266.1-201ENST00000624119 3569 ntBASIC4.64□□□□□ -1.67
SIX5Q8N196 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.64□□□□□ -1.67
SIX5Q8N196 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SIX5Q8N196 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SIX5Q8N196 RNU6-961P-201ENST00000363893 105 ntBASIC4.64□□□□□ -1.67
SIX5Q8N196 RNA5SP387-201ENST00000364226 106 ntBASIC4.64□□□□□ -1.67
SIX5Q8N196 Y_RNA.418-201ENST00000384029 102 ntBASIC4.64□□□□□ -1.67
SIX5Q8N196 RNU6-493P-201ENST00000391321 108 ntBASIC4.64□□□□□ -1.67
SIX5Q8N196 RN7SKP16-201ENST00000410180 299 ntBASIC4.64□□□□□ -1.67
SIX5Q8N196 RPL19P1-201ENST00000411635 428 ntBASIC4.64□□□□□ -1.67
SIX5Q8N196 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.64□□□□□ -1.67
SIX5Q8N196 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.64□□□□□ -1.67
SIX5Q8N196 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.64□□□□□ -1.67
SIX5Q8N196 RPL39P29-201ENST00000447779 157 ntBASIC4.64□□□□□ -1.67
SIX5Q8N196 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.64□□□□□ -1.67
SIX5Q8N196 Y_RNA.638-201ENST00000459374 113 ntBASIC4.64□□□□□ -1.67
SIX5Q8N196 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.64□□□□□ -1.67
SIX5Q8N196 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.64□□□□□ -1.67
SIX5Q8N196 VWA8P1-201ENST00000510889 176 ntBASIC4.64□□□□□ -1.67
SIX5Q8N196 AC010999.1-201ENST00000611856 324 ntBASIC4.64□□□□□ -1.67
SIX5Q8N196 AC068831.7-201ENST00000616954 363 ntBASIC4.64□□□□□ -1.67
SIX5Q8N196 MIR6075-201ENST00000620782 95 ntBASIC4.64□□□□□ -1.67
SIX5Q8N196 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.64□□□□□ -1.67
SIX5Q8N196 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.64□□□□□ -1.67
SIX5Q8N196 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SIX5Q8N196 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.64□□□□□ -1.67
SIX5Q8N196 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SIX5Q8N196 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.64□□□□□ -1.67
SIX5Q8N196 MAPK10-320ENST00000641462 6696 ntBASIC4.64□□□□□ -1.67
SIX5Q8N196 AC125257.1-201ENST00000560400 2930 ntBASIC4.63□□□□□ -1.67
SIX5Q8N196 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SIX5Q8N196 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SIX5Q8N196 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SIX5Q8N196 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX5Q8N196 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX5Q8N196 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX5Q8N196 RNU6-873P-201ENST00000363833 107 ntBASIC4.63□□□□□ -1.67
SIX5Q8N196 YPEL5P1-201ENST00000419731 367 ntBASIC4.63□□□□□ -1.67
SIX5Q8N196 AC104333.2-201ENST00000422630 192 ntBASIC4.63□□□□□ -1.67
SIX5Q8N196 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.63□□□□□ -1.67
SIX5Q8N196 HMGN2P10-201ENST00000448085 265 ntBASIC4.63□□□□□ -1.67
SIX5Q8N196 MRPS10P1-201ENST00000448483 130 ntBASIC4.63□□□□□ -1.67
SIX5Q8N196 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.63□□□□□ -1.67
SIX5Q8N196 AP001025.1-201ENST00000486139 332 ntBASIC4.63□□□□□ -1.67
SIX5Q8N196 RPS29P20-201ENST00000489592 171 ntBASIC4.63□□□□□ -1.67
SIX5Q8N196 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.63□□□□□ -1.67
SIX5Q8N196 Y_RNA.662-201ENST00000516028 97 ntBASIC4.63□□□□□ -1.67
SIX5Q8N196 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.63□□□□□ -1.67
SIX5Q8N196 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.63□□□□□ -1.67
SIX5Q8N196 AC112484.5-201ENST00000624189 228 ntBASIC4.63□□□□□ -1.67
SIX5Q8N196 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SIX5Q8N196 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SIX5Q8N196 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.63□□□□□ -1.67
SIX5Q8N196 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SIX5Q8N196 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SIX5Q8N196 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SIX5Q8N196 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms