Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 SNRPGP18-201ENST00000553000 214 ntBASIC3.66□□□□□ -1.82
SF3B3Q15393 BDH2P1-201ENST00000602288 736 ntBASIC3.66□□□□□ -1.82
SF3B3Q15393 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.66□□□□□ -1.82
SF3B3Q15393 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SF3B3Q15393 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SF3B3Q15393 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SF3B3Q15393 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SF3B3Q15393 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.65□□□□□ -1.82
SF3B3Q15393 RNU6-593P-201ENST00000364716 112 ntBASIC3.65□□□□□ -1.83
SF3B3Q15393 RPS12P24-201ENST00000412619 387 ntBASIC3.65□□□□□ -1.83
SF3B3Q15393 AC080125.1-201ENST00000414888 684 ntBASIC3.65□□□□□ -1.83
SF3B3Q15393 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.65□□□□□ -1.83
SF3B3Q15393 RPL31P12-201ENST00000422587 358 ntBASIC3.65□□□□□ -1.83
SF3B3Q15393 AC079780.1-201ENST00000428259 207 ntBASIC3.65□□□□□ -1.83
SF3B3Q15393 AL137792.2-201ENST00000443484 235 ntBASIC3.65□□□□□ -1.83
SF3B3Q15393 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.65□□□□□ -1.83
SF3B3Q15393 AP002884.2-201ENST00000471647 395 ntBASIC3.65□□□□□ -1.83
SF3B3Q15393 AC009901.1-201ENST00000506703 541 ntBASIC3.65□□□□□ -1.83
SF3B3Q15393 RNA5SP217-201ENST00000515959 91 ntBASIC3.65□□□□□ -1.83
SF3B3Q15393 SNORD59.2-201ENST00000516873 68 ntBASIC3.65□□□□□ -1.83
SF3B3Q15393 CYCSP27-201ENST00000527643 293 ntBASIC3.65□□□□□ -1.83
SF3B3Q15393 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.65□□□□□ -1.83
SF3B3Q15393 AC107016.2-201ENST00000547968 190 ntBASIC3.65□□□□□ -1.83
SF3B3Q15393 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.65□□□□□ -1.83
SF3B3Q15393 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.65□□□□□ -1.83
SF3B3Q15393 MIR15A-201ENST00000607334 83 ntBASIC3.65□□□□□ -1.83
SF3B3Q15393 MTND5P19-201ENST00000424872 1794 ntBASIC3.65□□□□□ -1.83
SF3B3Q15393 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SF3B3Q15393 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.65□□□□□ -1.83
SF3B3Q15393 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SF3B3Q15393 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SF3B3Q15393 AC062016.1-201ENST00000355719 319 ntBASIC3.64□□□□□ -1.83
SF3B3Q15393 Y_RNA.112-201ENST00000363250 102 ntBASIC3.64□□□□□ -1.83
SF3B3Q15393 Y_RNA.145-201ENST00000363527 102 ntBASIC3.64□□□□□ -1.83
SF3B3Q15393 RNU6-371P-201ENST00000364283 108 ntBASIC3.64□□□□□ -1.83
SF3B3Q15393 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SF3B3Q15393 SAR1AP2-201ENST00000392696 594 ntBASIC3.64□□□□□ -1.83
SF3B3Q15393 RPS4XP7-201ENST00000406274 780 ntBASIC3.64□□□□□ -1.83
SF3B3Q15393 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.64□□□□□ -1.83
SF3B3Q15393 RPL7P37-201ENST00000425095 738 ntBASIC3.64□□□□□ -1.83
SF3B3Q15393 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.64□□□□□ -1.83
SF3B3Q15393 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.64□□□□□ -1.83
SF3B3Q15393 RPL30P15-201ENST00000457129 321 ntBASIC3.64□□□□□ -1.83
SF3B3Q15393 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.64□□□□□ -1.83
SF3B3Q15393 MIR4319-201ENST00000577285 85 ntBASIC3.64□□□□□ -1.83
SF3B3Q15393 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.64□□□□□ -1.83
SF3B3Q15393 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.64□□□□□ -1.83
SF3B3Q15393 AC016925.2-201ENST00000605108 242 ntBASIC3.64□□□□□ -1.83
SF3B3Q15393 AC019193.3-201ENST00000609144 554 ntBASIC3.64□□□□□ -1.83
SF3B3Q15393 AC010378.1-201ENST00000619270 362 ntBASIC3.64□□□□□ -1.83
SF3B3Q15393 MTND5P10-201ENST00000603719 1809 ntBASIC3.64□□□□□ -1.83
SF3B3Q15393 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SF3B3Q15393 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SF3B3Q15393 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.63□□□□□ -1.83
SF3B3Q15393 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.63□□□□□ -1.83
SF3B3Q15393 RNU6-45P-201ENST00000384471 107 ntBASIC3.63□□□□□ -1.83
SF3B3Q15393 RNU6-310P-201ENST00000384655 107 ntBASIC3.63□□□□□ -1.83
SF3B3Q15393 RNA5SP184-201ENST00000411071 108 ntBASIC3.63□□□□□ -1.83
SF3B3Q15393 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.63□□□□□ -1.83
SF3B3Q15393 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.63□□□□□ -1.83
SF3B3Q15393 NUP35P1-201ENST00000422734 947 ntBASIC3.63□□□□□ -1.83
SF3B3Q15393 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.63□□□□□ -1.83
SF3B3Q15393 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.63□□□□□ -1.83
SF3B3Q15393 RPL21P41-201ENST00000459863 264 ntBASIC3.63□□□□□ -1.83
SF3B3Q15393 AC104472.2-201ENST00000469035 601 ntBASIC3.63□□□□□ -1.83
SF3B3Q15393 HSPE1P6-201ENST00000479457 291 ntBASIC3.63□□□□□ -1.83
SF3B3Q15393 SMURF2P1-201ENST00000514992 481 ntBASIC3.63□□□□□ -1.83
SF3B3Q15393 RNU6-1332P-201ENST00000516666 104 ntBASIC3.63□□□□□ -1.83
SF3B3Q15393 RNU6-1016P-201ENST00000516689 94 ntBASIC3.63□□□□□ -1.83
SF3B3Q15393 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SF3B3Q15393 AC079600.2-201ENST00000550076 130 ntBASIC3.63□□□□□ -1.83
SF3B3Q15393 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
SF3B3Q15393 SNORD84-203ENST00000584275 78 ntBASIC3.63□□□□□ -1.83
SF3B3Q15393 AC024153.1-201ENST00000603103 365 ntBASIC3.63□□□□□ -1.83
SF3B3Q15393 AC012119.1-201ENST00000603184 222 ntBASIC3.63□□□□□ -1.83
SF3B3Q15393 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.63□□□□□ -1.83
SF3B3Q15393 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SF3B3Q15393 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.62□□□□□ -1.83
SF3B3Q15393 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
SF3B3Q15393 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
SF3B3Q15393 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SF3B3Q15393 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SF3B3Q15393 MIR449A-201ENST00000362113 91 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 Y_RNA.28-201ENST00000362554 111 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 Y_RNA.534-201ENST00000384599 112 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 RNU6-308P-201ENST00000390957 107 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 RNU6-1077P-201ENST00000410506 102 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 Y_RNA.646-201ENST00000410980 101 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.62□□□□□ -1.83
SF3B3Q15393 AL590632.1-201ENST00000424289 371 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 HMGB1P27-201ENST00000431429 603 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.62□□□□□ -1.83
SF3B3Q15393 AC006539.3-201ENST00000454258 129 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 RPL37P6-201ENST00000460682 294 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.62□□□□□ -1.83
SF3B3Q15393 AC006483.1-201ENST00000487308 313 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 AC116337.1-201ENST00000509680 687 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 RNU6-927P-201ENST00000516199 100 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 RNU6-914P-201ENST00000516749 109 ntBASIC3.62□□□□□ -1.83
SF3B3Q15393 RNU6-1213P-201ENST00000517075 94 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms