Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.87□□□□□ -1.95
CLCNKAP51800 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.87□□□□□ -1.95
CLCNKAP51800 LRRC37A5P-203ENST00000580181 585 ntBASIC2.87□□□□□ -1.95
CLCNKAP51800 MTND4LP5-201ENST00000605152 292 ntBASIC2.87□□□□□ -1.95
CLCNKAP51800 AL627309.6-201ENST00000606857 840 ntBASIC2.87□□□□□ -1.95
CLCNKAP51800 AC069234.5-201ENST00000611056 416 ntBASIC2.87□□□□□ -1.95
CLCNKAP51800 Y_RNA.804-201ENST00000615262 101 ntBASIC2.87□□□□□ -1.95
CLCNKAP51800 AC022306.2-201ENST00000617563 647 ntBASIC2.87□□□□□ -1.95
CLCNKAP51800 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.87□□□□□ -1.95
CLCNKAP51800 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CLCNKAP51800 AL137790.1-201ENST00000634283 177 ntBASIC2.87□□□□□ -1.95
CLCNKAP51800 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.87□□□□□ -1.95
CLCNKAP51800 U2.21-201ENST00000637295 81 ntBASIC2.87□□□□□ -1.95
CLCNKAP51800 U6.99-201ENST00000637524 83 ntBASIC2.87□□□□□ -1.95
CLCNKAP51800 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.86□□□□□ -1.95
CLCNKAP51800 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CLCNKAP51800 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CLCNKAP51800 MIR412-201ENST00000362142 91 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 RNU6-778P-201ENST00000363269 103 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 SNORA80A-201ENST00000363922 136 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 RNU6-266P-201ENST00000364225 107 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 SNORD14B-201ENST00000364533 90 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 RNU6-166P-201ENST00000384371 107 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 Y_RNA.530-201ENST00000384587 101 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 RNU6-658P-201ENST00000384606 106 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 SNORA26.7-201ENST00000391288 122 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 EIF4E2P1-201ENST00000393781 255 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.86□□□□□ -1.95
CLCNKAP51800 USP9YP20-201ENST00000419224 558 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 PDCL2P1-201ENST00000419302 352 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 AL139281.1-201ENST00000422120 335 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 COTL1P1-201ENST00000422309 375 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.86□□□□□ -1.95
CLCNKAP51800 AC098614.2-201ENST00000426040 255 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 RPL21P2-201ENST00000440049 481 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.86□□□□□ -1.95
CLCNKAP51800 snoU13.28-201ENST00000459235 104 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 SNORA14.1-201ENST00000516113 141 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 RN7SKP43-201ENST00000516173 320 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 RNU6-875P-201ENST00000516488 106 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 SCARNA13-201ENST00000516672 275 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.86□□□□□ -1.95
CLCNKAP51800 UBE2V2P2-201ENST00000587677 504 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLCNKAP51800 AC104260.1-201ENST00000616660 539 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.86□□□□□ -1.95
CLCNKAP51800 AC006386.2-201ENST00000624491 75 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 AC012005.1-201ENST00000624575 75 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLCNKAP51800 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CLCNKAP51800 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.86□□□□□ -1.95
CLCNKAP51800 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.86□□□□□ -1.95
CLCNKAP51800 MTND4P12-201ENST00000498999 1377 ntBASIC2.86□□□□□ -1.95
CLCNKAP51800 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLCNKAP51800 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLCNKAP51800 RNU6-845P-201ENST00000362578 103 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 RNU1-73P-201ENST00000383971 164 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 Y_RNA.414-201ENST00000384011 101 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 FO393413.1-201ENST00000402892 195 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 RNU2-25P-201ENST00000411041 191 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 Y_RNA.623-201ENST00000411128 95 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 RNA5SP492-201ENST00000411330 114 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 AL353729.1-201ENST00000425044 720 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 MTCO3P46-201ENST00000425787 232 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.85□□□□□ -1.95
CLCNKAP51800 BRK1P2-201ENST00000442875 223 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 AL078601.1-201ENST00000444542 271 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 UBBP3-201ENST00000445497 241 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 RN7SL499P-201ENST00000481141 276 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 AC011005.2-201ENST00000487324 359 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 HMGB1P30-201ENST00000492455 606 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 AC114781.4-201ENST00000513707 639 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 MIR892C-201ENST00000516410 77 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 RNU6-273P-201ENST00000516937 96 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 RNU6-703P-201ENST00000516946 107 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 SNORA25.17-201ENST00000517184 124 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 AC087241.2-201ENST00000535801 324 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.85□□□□□ -1.95
CLCNKAP51800 AL391261.3-201ENST00000557194 520 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 AC026464.5-201ENST00000562497 722 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 MIR3942-201ENST00000585264 109 ntBASIC2.85□□□□□ -1.95
CLCNKAP51800 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.85□□□□□ -1.95
CLCNKAP51800 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CLCNKAP51800 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CLCNKAP51800 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLCNKAP51800 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.84□□□□□ -1.95
CLCNKAP51800 AC138393.1-203ENST00000327086 343 ntBASIC2.84□□□□□ -1.95
CLCNKAP51800 RNU6-1180P-201ENST00000364935 107 ntBASIC2.84□□□□□ -1.95
CLCNKAP51800 MIR10A-201ENST00000385043 110 ntBASIC2.84□□□□□ -1.95
CLCNKAP51800 MIR634-201ENST00000385208 97 ntBASIC2.84□□□□□ -1.95
CLCNKAP51800 MIR888-201ENST00000401186 77 ntBASIC2.84□□□□□ -1.95
CLCNKAP51800 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.84□□□□□ -1.95
CLCNKAP51800 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.84□□□□□ -1.95
CLCNKAP51800 PGBD4P6-201ENST00000421501 610 ntBASIC2.84□□□□□ -1.95
CLCNKAP51800 IFNA20P-201ENST00000436840 528 ntBASIC2.84□□□□□ -1.95
CLCNKAP51800 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.84□□□□□ -1.95
CLCNKAP51800 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.84□□□□□ -1.95
CLCNKAP51800 SNRPEP8-201ENST00000442866 260 ntBASIC2.84□□□□□ -1.95
CLCNKAP51800 RNU7-23P-201ENST00000459465 62 ntBASIC2.84□□□□□ -1.95
CLCNKAP51800 RPL7P43-201ENST00000478876 753 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms