Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 Y_RNA.472-201ENST00000384322 102 ntBASIC1.11□□□□□ -2.23
CDC34P49427 RNU2-41P-201ENST00000410991 178 ntBASIC1.11□□□□□ -2.23
CDC34P49427 AC092809.3-201ENST00000415453 231 ntBASIC1.11□□□□□ -2.23
CDC34P49427 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CDC34P49427 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.11□□□□□ -2.23
CDC34P49427 RPS27P16-201ENST00000425758 201 ntBASIC1.11□□□□□ -2.23
CDC34P49427 AL354695.1-201ENST00000427935 228 ntBASIC1.11□□□□□ -2.23
CDC34P49427 UBE2V1P8-201ENST00000437166 265 ntBASIC1.11□□□□□ -2.23
CDC34P49427 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.11□□□□□ -2.23
CDC34P49427 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.11□□□□□ -2.23
CDC34P49427 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.11□□□□□ -2.23
CDC34P49427 SNRPGP13-201ENST00000442212 177 ntBASIC1.11□□□□□ -2.23
CDC34P49427 RPL7P36-201ENST00000444633 681 ntBASIC1.11□□□□□ -2.23
CDC34P49427 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.11□□□□□ -2.23
CDC34P49427 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.11□□□□□ -2.23
CDC34P49427 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.11□□□□□ -2.23
CDC34P49427 AC137800.2-201ENST00000574375 120 ntBASIC1.11□□□□□ -2.23
CDC34P49427 BNIP3P33-201ENST00000598912 569 ntBASIC1.11□□□□□ -2.23
CDC34P49427 VN1R82P-201ENST00000601481 356 ntBASIC1.11□□□□□ -2.23
CDC34P49427 AC084824.5-201ENST00000612009 413 ntBASIC1.11□□□□□ -2.23
CDC34P49427 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.11□□□□□ -2.23
CDC34P49427 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CDC34P49427 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
CDC34P49427 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.11□□□□□ -2.23
CDC34P49427 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
CDC34P49427 RNU6-413P-201ENST00000384115 107 ntBASIC1.1□□□□□ -2.23
CDC34P49427 RNU6-298P-201ENST00000390888 96 ntBASIC1.1□□□□□ -2.23
CDC34P49427 AL627390.1-201ENST00000396055 340 ntBASIC1.1□□□□□ -2.23
CDC34P49427 RNA5SP390-201ENST00000410191 113 ntBASIC1.1□□□□□ -2.23
CDC34P49427 FTH1P12-201ENST00000432137 551 ntBASIC1.1□□□□□ -2.23
CDC34P49427 LARP1BP3-201ENST00000437229 869 ntBASIC1.1□□□□□ -2.23
CDC34P49427 AL121601.2-201ENST00000438019 707 ntBASIC1.1□□□□□ -2.23
CDC34P49427 AC027119.1-201ENST00000440877 241 ntBASIC1.1□□□□□ -2.23
CDC34P49427 JTBP1-201ENST00000441314 247 ntBASIC1.1□□□□□ -2.23
CDC34P49427 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CDC34P49427 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CDC34P49427 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.1□□□□□ -2.23
CDC34P49427 RNU6-333P-201ENST00000459117 107 ntBASIC1.1□□□□□ -2.23
CDC34P49427 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.1□□□□□ -2.23
CDC34P49427 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
CDC34P49427 AC108043.1-201ENST00000512696 574 ntBASIC1.1□□□□□ -2.23
CDC34P49427 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CDC34P49427 RNU6-677P-201ENST00000516914 101 ntBASIC1.1□□□□□ -2.23
CDC34P49427 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.1□□□□□ -2.23
CDC34P49427 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.1□□□□□ -2.23
CDC34P49427 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
CDC34P49427 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.1□□□□□ -2.23
CDC34P49427 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CDC34P49427 AC009712.1-201ENST00000564938 316 ntBASIC1.1□□□□□ -2.23
CDC34P49427 MIR4648-201ENST00000580107 72 ntBASIC1.1□□□□□ -2.23
CDC34P49427 MIR15A-201ENST00000607334 83 ntBASIC1.1□□□□□ -2.23
CDC34P49427 AC063943.3-201ENST00000615562 356 ntBASIC1.1□□□□□ -2.23
CDC34P49427 AC006338.1-201ENST00000618453 749 ntBASIC1.1□□□□□ -2.23
CDC34P49427 ICE2P2-201ENST00000483823 2787 ntBASIC1.09□□□□□ -2.23
CDC34P49427 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
CDC34P49427 RNU6-212P-201ENST00000362642 104 ntBASIC1.09□□□□□ -2.23
CDC34P49427 U8.1-201ENST00000362843 134 ntBASIC1.09□□□□□ -2.23
CDC34P49427 RNU6-112P-201ENST00000363599 104 ntBASIC1.09□□□□□ -2.23
CDC34P49427 SNORD1A-201ENST00000364968 72 ntBASIC1.09□□□□□ -2.23
CDC34P49427 RNU6-72P-201ENST00000384285 79 ntBASIC1.09□□□□□ -2.23
CDC34P49427 SNORD116-20-201ENST00000384529 92 ntBASIC1.09□□□□□ -2.23
CDC34P49427 MIR504-201ENST00000385065 83 ntBASIC1.09□□□□□ -2.23
CDC34P49427 MIR758-201ENST00000390227 88 ntBASIC1.09□□□□□ -2.23
CDC34P49427 Y_RNA.597-201ENST00000410463 100 ntBASIC1.09□□□□□ -2.23
CDC34P49427 Y_RNA.623-201ENST00000411128 95 ntBASIC1.09□□□□□ -2.23
CDC34P49427 RNA5SP508-201ENST00000411327 119 ntBASIC1.09□□□□□ -2.23
CDC34P49427 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.09□□□□□ -2.23
CDC34P49427 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.09□□□□□ -2.23
CDC34P49427 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.09□□□□□ -2.23
CDC34P49427 AL358453.1-201ENST00000422522 250 ntBASIC1.09□□□□□ -2.23
CDC34P49427 AL589872.1-201ENST00000426602 288 ntBASIC1.09□□□□□ -2.23
CDC34P49427 HMGB3P12-201ENST00000438745 556 ntBASIC1.09□□□□□ -2.23
CDC34P49427 AC007327.1-201ENST00000447461 264 ntBASIC1.09□□□□□ -2.23
CDC34P49427 SNORD97-201ENST00000459187 142 ntBASIC1.09□□□□□ -2.23
CDC34P49427 AC068587.2-201ENST00000478386 781 ntBASIC1.09□□□□□ -2.23
CDC34P49427 RPL26P26-201ENST00000480251 434 ntBASIC1.09□□□□□ -2.23
CDC34P49427 AC112198.4-201ENST00000515450 351 ntBASIC1.09□□□□□ -2.23
CDC34P49427 SNORA31.24-201ENST00000517232 57 ntBASIC1.09□□□□□ -2.23
CDC34P49427 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.09□□□□□ -2.23
CDC34P49427 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.09□□□□□ -2.23
CDC34P49427 SNORD53B-201ENST00000577887 78 ntBASIC1.09□□□□□ -2.23
CDC34P49427 AC068620.3-201ENST00000602749 560 ntBASIC1.09□□□□□ -2.23
CDC34P49427 AC022022.2-201ENST00000602989 360 ntBASIC1.09□□□□□ -2.23
CDC34P49427 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.09□□□□□ -2.23
CDC34P49427 AL590240.4-201ENST00000616908 390 ntBASIC1.09□□□□□ -2.23
CDC34P49427 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.09□□□□□ -2.23
CDC34P49427 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.09□□□□□ -2.23
CDC34P49427 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.09□□□□□ -2.24
CDC34P49427 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
CDC34P49427 SNORD114-6-201ENST00000364393 72 ntBASIC1.08□□□□□ -2.24
CDC34P49427 Y_RNA.255-201ENST00000364581 97 ntBASIC1.08□□□□□ -2.24
CDC34P49427 SNORA67.6-201ENST00000391093 99 ntBASIC1.08□□□□□ -2.24
CDC34P49427 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.08□□□□□ -2.24
CDC34P49427 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.08□□□□□ -2.24
CDC34P49427 AC015922.2-201ENST00000435593 184 ntBASIC1.08□□□□□ -2.24
CDC34P49427 AL135790.2-201ENST00000437701 267 ntBASIC1.08□□□□□ -2.24
CDC34P49427 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.08□□□□□ -2.24
CDC34P49427 CALM1P1-201ENST00000442082 433 ntBASIC1.08□□□□□ -2.24
CDC34P49427 MTND2P4-201ENST00000445034 1004 ntBASIC1.08□□□□□ -2.24
CDC34P49427 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms