Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 RNU1-30P-201ENST00000606575 163 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 AL159153.1-201ENST00000619688 317 ntBASIC4.07□□□□□ -1.76
ITGA4P13612 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.07□□□□□ -1.76
ITGA4P13612 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.07□□□□□ -1.76
ITGA4P13612 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.06□□□□□ -1.76
ITGA4P13612 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.06□□□□□ -1.76
ITGA4P13612 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ITGA4P13612 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
ITGA4P13612 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.06□□□□□ -1.76
ITGA4P13612 AC233263.6-201ENST00000631132 1963 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 RNU6-50P-201ENST00000362356 103 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 SNORA31-201ENST00000362607 130 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 Y_RNA.288-201ENST00000364854 92 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 RNU6-806P-201ENST00000365147 105 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 RNU6-217P-201ENST00000384164 104 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 RN7SKP58-201ENST00000411010 305 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.06□□□□□ -1.76
ITGA4P13612 RPS29P4-201ENST00000414733 161 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 AC093578.1-201ENST00000415219 368 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 MTCO3P19-201ENST00000415864 321 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 HMGN2P31-201ENST00000432430 273 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ITGA4P13612 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.06□□□□□ -1.76
ITGA4P13612 AC106707.2-201ENST00000484182 374 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 AC010265.1-201ENST00000513509 211 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 RNU6-408P-201ENST00000515910 100 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 RNU1-103P-201ENST00000516502 125 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 RNU6-911P-201ENST00000516523 104 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 RNU6-388P-201ENST00000517012 105 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 RNU6-389P-201ENST00000517048 105 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 RNU6-1183P-201ENST00000517054 60 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 RN7SKP289-201ENST00000517244 295 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ITGA4P13612 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.06□□□□□ -1.76
ITGA4P13612 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.06□□□□□ -1.76
ITGA4P13612 RPS29P30-201ENST00000600975 111 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 AC069200.1-201ENST00000609511 323 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 FTX_3.1-201ENST00000610451 147 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.06□□□□□ -1.76
ITGA4P13612 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.06□□□□□ -1.76
ITGA4P13612 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.06□□□□□ -1.76
ITGA4P13612 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.06□□□□□ -1.76
ITGA4P13612 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
ITGA4P13612 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ITGA4P13612 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.06□□□□□ -1.76
ITGA4P13612 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ITGA4P13612 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ITGA4P13612 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
ITGA4P13612 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ITGA4P13612 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ITGA4P13612 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
ITGA4P13612 Y_RNA.64-201ENST00000362845 102 ntBASIC4.05□□□□□ -1.76
ITGA4P13612 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ITGA4P13612 HLFP1-201ENST00000402375 499 ntBASIC4.05□□□□□ -1.76
ITGA4P13612 U3.37-201ENST00000408528 213 ntBASIC4.05□□□□□ -1.76
ITGA4P13612 RNA5SP129-201ENST00000410276 118 ntBASIC4.05□□□□□ -1.76
ITGA4P13612 RNU2-71P-201ENST00000411395 189 ntBASIC4.05□□□□□ -1.76
ITGA4P13612 RAC1P3-201ENST00000416129 580 ntBASIC4.05□□□□□ -1.76
ITGA4P13612 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.05□□□□□ -1.76
ITGA4P13612 FCF1P4-201ENST00000448326 183 ntBASIC4.05□□□□□ -1.76
ITGA4P13612 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.05□□□□□ -1.76
ITGA4P13612 snoU13.22-201ENST00000459428 104 ntBASIC4.05□□□□□ -1.76
ITGA4P13612 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.05□□□□□ -1.76
ITGA4P13612 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.05□□□□□ -1.76
ITGA4P13612 RNA5SP208-201ENST00000516156 78 ntBASIC4.05□□□□□ -1.76
ITGA4P13612 RNU6-1282P-201ENST00000516735 96 ntBASIC4.05□□□□□ -1.76
ITGA4P13612 SNORA40.15-201ENST00000516884 107 ntBASIC4.05□□□□□ -1.76
ITGA4P13612 SNORA31.18-201ENST00000517043 134 ntBASIC4.05□□□□□ -1.76
ITGA4P13612 AC109329.1-201ENST00000518744 317 ntBASIC4.05□□□□□ -1.76
ITGA4P13612 AC010186.2-204ENST00000537668 439 ntBASIC4.05□□□□□ -1.76
ITGA4P13612 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.05□□□□□ -1.76
ITGA4P13612 ZNF192P1-203ENST00000565888 810 ntBASIC4.05□□□□□ -1.76
ITGA4P13612 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.05□□□□□ -1.76
ITGA4P13612 MIR3690-201ENST00000580266 75 ntBASIC4.05□□□□□ -1.76
ITGA4P13612 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.05□□□□□ -1.76
ITGA4P13612 AL137849.1-201ENST00000604767 169 ntBASIC4.05□□□□□ -1.76
ITGA4P13612 AC019176.2-201ENST00000611579 315 ntBASIC4.05□□□□□ -1.76
ITGA4P13612 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ITGA4P13612 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
ITGA4P13612 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ITGA4P13612 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ITGA4P13612 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ITGA4P13612 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ITGA4P13612 SNORA63.1-201ENST00000362493 131 ntBASIC4.04□□□□□ -1.76
ITGA4P13612 RNU6-105P-201ENST00000363909 104 ntBASIC4.04□□□□□ -1.76
ITGA4P13612 RNU6-898P-201ENST00000365627 104 ntBASIC4.04□□□□□ -1.76
ITGA4P13612 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.04□□□□□ -1.76
ITGA4P13612 RNU6-708P-201ENST00000384217 107 ntBASIC4.04□□□□□ -1.76
ITGA4P13612 Y_RNA.471-201ENST00000384312 102 ntBASIC4.04□□□□□ -1.76
ITGA4P13612 Y_RNA.483-201ENST00000384380 101 ntBASIC4.04□□□□□ -1.76
ITGA4P13612 MT-TW-201ENST00000387382 68 ntBASIC4.04□□□□□ -1.76
ITGA4P13612 RNA5SP424-201ENST00000390988 115 ntBASIC4.04□□□□□ -1.76
ITGA4P13612 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.04□□□□□ -1.76
ITGA4P13612 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.04□□□□□ -1.76
ITGA4P13612 CRYBB2P1-203ENST00000415709 538 ntBASIC4.04□□□□□ -1.76
ITGA4P13612 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ITGA4P13612 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.04□□□□□ -1.76
ITGA4P13612 AL645939.1-201ENST00000453429 797 ntBASIC4.04□□□□□ -1.76
ITGA4P13612 RN7SKP210-201ENST00000459176 261 ntBASIC4.04□□□□□ -1.76
ITGA4P13612 RNU2-53P-201ENST00000516257 147 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms