Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.3□□□□□ -1.72
PDGFAP04085 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.3□□□□□ -1.72
PDGFAP04085 AC007395.1-201ENST00000451333 677 ntBASIC4.3□□□□□ -1.72
PDGFAP04085 RPS26P3-201ENST00000470205 348 ntBASIC4.3□□□□□ -1.72
PDGFAP04085 AC090543.2-201ENST00000483963 348 ntBASIC4.3□□□□□ -1.72
PDGFAP04085 AC004057.1-201ENST00000485827 348 ntBASIC4.3□□□□□ -1.72
PDGFAP04085 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.3□□□□□ -1.72
PDGFAP04085 AC091959.1-201ENST00000495857 238 ntBASIC4.3□□□□□ -1.72
PDGFAP04085 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.3□□□□□ -1.72
PDGFAP04085 RNA5SP497-201ENST00000516081 97 ntBASIC4.3□□□□□ -1.72
PDGFAP04085 RNU6-1212P-201ENST00000517023 104 ntBASIC4.3□□□□□ -1.72
PDGFAP04085 RNU6-709P-201ENST00000517257 104 ntBASIC4.3□□□□□ -1.72
PDGFAP04085 RPL23AP53-201ENST00000521854 457 ntBASIC4.3□□□□□ -1.72
PDGFAP04085 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.3□□□□□ -1.72
PDGFAP04085 AC087441.2-201ENST00000529141 262 ntBASIC4.3□□□□□ -1.72
PDGFAP04085 CYCSP29-201ENST00000533731 318 ntBASIC4.3□□□□□ -1.72
PDGFAP04085 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.3□□□□□ -1.72
PDGFAP04085 VN1R85P-201ENST00000601587 426 ntBASIC4.3□□□□□ -1.72
PDGFAP04085 AC024220.1-201ENST00000603675 484 ntBASIC4.3□□□□□ -1.72
PDGFAP04085 AC114781.5-201ENST00000615297 108 ntBASIC4.3□□□□□ -1.72
PDGFAP04085 AC140113.4-201ENST00000622087 222 ntBASIC4.3□□□□□ -1.72
PDGFAP04085 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.3□□□□□ -1.72
PDGFAP04085 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
PDGFAP04085 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.3□□□□□ -1.72
PDGFAP04085 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PDGFAP04085 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
PDGFAP04085 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.3□□□□□ -1.72
PDGFAP04085 AC004944.1-201ENST00000517807 3059 ntBASIC4.3□□□□□ -1.72
PDGFAP04085 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFAP04085 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFAP04085 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFAP04085 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFAP04085 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFAP04085 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.29□□□□□ -1.72
PDGFAP04085 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
PDGFAP04085 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFAP04085 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.29□□□□□ -1.72
PDGFAP04085 AC021146.4-201ENST00000309229 279 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 UBE2WP1-201ENST00000362030 340 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 RNU1-20P-201ENST00000363314 162 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 Y_RNA.136-201ENST00000363444 102 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 MIR134-201ENST00000385258 73 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 SNORA48.7-201ENST00000391302 135 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 RN7SKP267-201ENST00000410381 285 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 COX6CP10-201ENST00000416832 224 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 AC019205.3-201ENST00000424573 156 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.29□□□□□ -1.72
PDGFAP04085 SETP5-201ENST00000437270 562 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 HMGB1P37-201ENST00000439613 609 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 AC010095.1-201ENST00000443543 144 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 AP000705.1-201ENST00000454567 350 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.29□□□□□ -1.72
PDGFAP04085 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.29□□□□□ -1.72
PDGFAP04085 SNORD116-28-201ENST00000516123 91 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 Y_RNA.683-201ENST00000516508 93 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.29□□□□□ -1.72
PDGFAP04085 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.29□□□□□ -1.72
PDGFAP04085 AC106785.1-201ENST00000565935 262 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.29□□□□□ -1.72
PDGFAP04085 AC072026.1-201ENST00000605023 201 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.29□□□□□ -1.72
PDGFAP04085 ZYXP1-201ENST00000617638 118 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 AC005086.4-201ENST00000623065 213 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 U3.53-201ENST00000628922 216 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFAP04085 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.29□□□□□ -1.72
PDGFAP04085 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFAP04085 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFAP04085 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
PDGFAP04085 AC002543.1-201ENST00000299783 1954 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFAP04085 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFAP04085 ZNF137P-201ENST00000456718 1920 ntBASIC4.29□□□□□ -1.72
PDGFAP04085 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.28□□□□□ -1.72
PDGFAP04085 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.28□□□□□ -1.72
PDGFAP04085 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.28□□□□□ -1.72
PDGFAP04085 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.28□□□□□ -1.72
PDGFAP04085 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.28□□□□□ -1.72
PDGFAP04085 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.28□□□□□ -1.72
PDGFAP04085 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDGFAP04085 RNA5SP502-201ENST00000362694 119 ntBASIC4.28□□□□□ -1.72
PDGFAP04085 Y_RNA.82-201ENST00000363000 102 ntBASIC4.28□□□□□ -1.72
PDGFAP04085 Y_RNA.92-201ENST00000363043 102 ntBASIC4.28□□□□□ -1.72
PDGFAP04085 Y_RNA.235-201ENST00000364412 102 ntBASIC4.28□□□□□ -1.72
PDGFAP04085 Y_RNA.306-201ENST00000365015 102 ntBASIC4.28□□□□□ -1.72
PDGFAP04085 Y_RNA.312-201ENST00000365089 102 ntBASIC4.28□□□□□ -1.72
PDGFAP04085 Y_RNA.322-201ENST00000365151 102 ntBASIC4.28□□□□□ -1.72
PDGFAP04085 Y_RNA.446-201ENST00000384178 104 ntBASIC4.28□□□□□ -1.72
PDGFAP04085 AC138623.1-201ENST00000418060 216 ntBASIC4.28□□□□□ -1.72
PDGFAP04085 RPL23AP82-202ENST00000427528 469 ntBASIC4.28□□□□□ -1.72
PDGFAP04085 AL161651.1-201ENST00000440882 223 ntBASIC4.28□□□□□ -1.72
PDGFAP04085 HMGN2P16-201ENST00000456802 261 ntBASIC4.28□□□□□ -1.72
PDGFAP04085 Y_RNA.650-201ENST00000459002 102 ntBASIC4.28□□□□□ -1.72
PDGFAP04085 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.28□□□□□ -1.72
PDGFAP04085 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.28□□□□□ -1.72
PDGFAP04085 SNORA27.4-201ENST00000516650 95 ntBASIC4.28□□□□□ -1.72
PDGFAP04085 Y_RNA.777-201ENST00000516982 102 ntBASIC4.28□□□□□ -1.72
PDGFAP04085 AC233702.2-202ENST00000562547 291 ntBASIC4.28□□□□□ -1.72
PDGFAP04085 MIR4282-201ENST00000583613 67 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 180.9 ms