Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 SNORD3E-201ENST00000362899 217 ntBASIC3□□□□□ -1.93
DDX58O95786 AL031779.1-201ENST00000415663 330 ntBASIC3□□□□□ -1.93
DDX58O95786 AL135786.1-201ENST00000415892 214 ntBASIC3□□□□□ -1.93
DDX58O95786 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3□□□□□ -1.93
DDX58O95786 RPL23AP20-201ENST00000447965 421 ntBASIC3□□□□□ -1.93
DDX58O95786 NDUFB1P2-201ENST00000449477 176 ntBASIC3□□□□□ -1.93
DDX58O95786 SRRM1P2-201ENST00000464531 1192 ntBASIC3□□□□□ -1.93
DDX58O95786 RPL36AP48-201ENST00000485521 314 ntBASIC3□□□□□ -1.93
DDX58O95786 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3□□□□□ -1.93
DDX58O95786 AC092436.1-201ENST00000506450 503 ntBASIC3□□□□□ -1.93
DDX58O95786 RNA5SP112-201ENST00000515937 99 ntBASIC3□□□□□ -1.93
DDX58O95786 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3□□□□□ -1.93
DDX58O95786 AC025678.1-201ENST00000567861 338 ntBASIC3□□□□□ -1.93
DDX58O95786 MTCO3P13-201ENST00000577757 781 ntBASIC3□□□□□ -1.93
DDX58O95786 MTATP6P3-201ENST00000581686 676 ntBASIC3□□□□□ -1.93
DDX58O95786 AC012557.2-201ENST00000605919 418 ntBASIC3□□□□□ -1.93
DDX58O95786 AP001486.3-201ENST00000615334 372 ntBASIC3□□□□□ -1.93
DDX58O95786 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3□□□□□ -1.93
DDX58O95786 AC124864.2-201ENST00000624736 186 ntBASIC3□□□□□ -1.93
DDX58O95786 AC005609.4-201ENST00000625071 447 ntBASIC3□□□□□ -1.93
DDX58O95786 MIR7157-201ENST00000635801 60 ntBASIC3□□□□□ -1.93
DDX58O95786 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
DDX58O95786 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.99□□□□□ -1.93
DDX58O95786 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.99□□□□□ -1.93
DDX58O95786 AC006020.1-201ENST00000420179 1854 ntBASIC2.99□□□□□ -1.93
DDX58O95786 RNU6-371P-201ENST00000364283 108 ntBASIC2.99□□□□□ -1.93
DDX58O95786 AL139095.1-201ENST00000404326 391 ntBASIC2.99□□□□□ -1.93
DDX58O95786 SNORA3.2-201ENST00000408221 125 ntBASIC2.99□□□□□ -1.93
DDX58O95786 RNU4-46P-201ENST00000410818 138 ntBASIC2.99□□□□□ -1.93
DDX58O95786 EEF1A1P40-201ENST00000412883 573 ntBASIC2.99□□□□□ -1.93
DDX58O95786 AL353193.1-201ENST00000421444 268 ntBASIC2.99□□□□□ -1.93
DDX58O95786 PGBD4P6-201ENST00000421501 610 ntBASIC2.99□□□□□ -1.93
DDX58O95786 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.99□□□□□ -1.93
DDX58O95786 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
DDX58O95786 AL118520.1-201ENST00000450770 291 ntBASIC2.99□□□□□ -1.93
DDX58O95786 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.99□□□□□ -1.93
DDX58O95786 AL356010.1-201ENST00000456364 102 ntBASIC2.99□□□□□ -1.93
DDX58O95786 RNA5SP281-201ENST00000516504 135 ntBASIC2.99□□□□□ -1.93
DDX58O95786 SCARNA3-201ENST00000517097 143 ntBASIC2.99□□□□□ -1.93
DDX58O95786 AC135279.1-201ENST00000543493 504 ntBASIC2.99□□□□□ -1.93
DDX58O95786 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.99□□□□□ -1.93
DDX58O95786 AL670379.10-201ENST00000604330 253 ntBASIC2.99□□□□□ -1.93
DDX58O95786 AL670379.9-201ENST00000605428 253 ntBASIC2.99□□□□□ -1.93
DDX58O95786 RPL23AP88-201ENST00000605759 454 ntBASIC2.99□□□□□ -1.93
DDX58O95786 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.99□□□□□ -1.93
DDX58O95786 AC139792.2-201ENST00000624218 587 ntBASIC2.99□□□□□ -1.93
DDX58O95786 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.99□□□□□ -1.93
DDX58O95786 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
DDX58O95786 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
DDX58O95786 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.99□□□□□ -1.93
DDX58O95786 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
DDX58O95786 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
DDX58O95786 ZNF658B-202ENST00000615961 3375 ntBASIC2.98□□□□□ -1.93
DDX58O95786 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
DDX58O95786 AL109809.4-201ENST00000603520 2185 ntBASIC2.98□□□□□ -1.93
DDX58O95786 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.98□□□□□ -1.93
DDX58O95786 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
DDX58O95786 RNU6-486P-201ENST00000363116 107 ntBASIC2.98□□□□□ -1.93
DDX58O95786 MIR518D-201ENST00000385014 87 ntBASIC2.98□□□□□ -1.93
DDX58O95786 MTCO3P40-201ENST00000392516 676 ntBASIC2.98□□□□□ -1.93
DDX58O95786 FTH1P15-201ENST00000406984 280 ntBASIC2.98□□□□□ -1.93
DDX58O95786 RNU2-29P-201ENST00000410423 189 ntBASIC2.98□□□□□ -1.93
DDX58O95786 RNU6-1328P-201ENST00000410938 106 ntBASIC2.98□□□□□ -1.93
DDX58O95786 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.98□□□□□ -1.93
DDX58O95786 MTCYBP8-201ENST00000422855 651 ntBASIC2.98□□□□□ -1.93
DDX58O95786 BX276092.3-201ENST00000424182 230 ntBASIC2.98□□□□□ -1.93
DDX58O95786 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.98□□□□□ -1.93
DDX58O95786 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.98□□□□□ -1.93
DDX58O95786 AL606489.2-201ENST00000433886 234 ntBASIC2.98□□□□□ -1.93
DDX58O95786 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.98□□□□□ -1.93
DDX58O95786 MTND1P1-201ENST00000445453 368 ntBASIC2.98□□□□□ -1.93
DDX58O95786 AC006026.2-201ENST00000457376 180 ntBASIC2.98□□□□□ -1.93
DDX58O95786 SNRPFP3-201ENST00000457792 225 ntBASIC2.98□□□□□ -1.93
DDX58O95786 AC133134.1-201ENST00000466800 359 ntBASIC2.98□□□□□ -1.93
DDX58O95786 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.98□□□□□ -1.93
DDX58O95786 RPL37P25-201ENST00000507308 276 ntBASIC2.98□□□□□ -1.93
DDX58O95786 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.98□□□□□ -1.93
DDX58O95786 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.98□□□□□ -1.93
DDX58O95786 AP004607.1-201ENST00000524456 203 ntBASIC2.98□□□□□ -1.93
DDX58O95786 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.98□□□□□ -1.93
DDX58O95786 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.98□□□□□ -1.93
DDX58O95786 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.98□□□□□ -1.93
DDX58O95786 AC060766.3-201ENST00000591442 263 ntBASIC2.98□□□□□ -1.93
DDX58O95786 AL021997.1-201ENST00000605757 193 ntBASIC2.98□□□□□ -1.93
DDX58O95786 AP001596.2-201ENST00000608410 312 ntBASIC2.98□□□□□ -1.93
DDX58O95786 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
DDX58O95786 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
DDX58O95786 SNORD14B-201ENST00000364533 90 ntBASIC2.97□□□□□ -1.93
DDX58O95786 RNU6-715P-201ENST00000365204 103 ntBASIC2.97□□□□□ -1.93
DDX58O95786 RNU6-996P-201ENST00000365438 107 ntBASIC2.97□□□□□ -1.93
DDX58O95786 SNORA70B-201ENST00000384210 135 ntBASIC2.97□□□□□ -1.93
DDX58O95786 RNU6-45P-201ENST00000384471 107 ntBASIC2.97□□□□□ -1.93
DDX58O95786 AL133475.1-201ENST00000404414 305 ntBASIC2.97□□□□□ -1.93
DDX58O95786 RPL19P1-201ENST00000411635 428 ntBASIC2.97□□□□□ -1.93
DDX58O95786 AL356320.1-201ENST00000429616 163 ntBASIC2.97□□□□□ -1.93
DDX58O95786 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.97□□□□□ -1.93
DDX58O95786 AC004383.1-201ENST00000438135 289 ntBASIC2.97□□□□□ -1.93
DDX58O95786 RPL7P54-201ENST00000438336 674 ntBASIC2.97□□□□□ -1.93
DDX58O95786 AL360271.2-201ENST00000447710 161 ntBASIC2.97□□□□□ -1.93
DDX58O95786 PSPHP1-201ENST00000450062 261 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms