Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC0.22□□□□□ -2.37
LTN1O94822 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.22□□□□□ -2.37
LTN1O94822 CR383656.7-201ENST00000548164 174 ntBASIC0.22□□□□□ -2.37
LTN1O94822 AC009268.1-201ENST00000561352 1203 ntBASIC0.22□□□□□ -2.37
LTN1O94822 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.22□□□□□ -2.37
LTN1O94822 AC112220.3-201ENST00000605502 502 ntBASIC0.22□□□□□ -2.37
LTN1O94822 MIR6134-201ENST00000617606 109 ntBASIC0.22□□□□□ -2.37
LTN1O94822 RPS3AP36-201ENST00000398190 775 ntBASIC0.22□□□□□ -2.37
LTN1O94822 AL591034.2-201ENST00000402839 359 ntBASIC0.22□□□□□ -2.37
LTN1O94822 HMGB1P17-201ENST00000403495 628 ntBASIC0.22□□□□□ -2.37
LTN1O94822 MTND5P14-201ENST00000441481 1267 ntBASIC0.22□□□□□ -2.37
LTN1O94822 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.22□□□□□ -2.37
LTN1O94822 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.22□□□□□ -2.37
LTN1O94822 AP003066.2-201ENST00000529375 555 ntBASIC0.22□□□□□ -2.37
LTN1O94822 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.22□□□□□ -2.37
LTN1O94822 SNORD114-24-201ENST00000365029 72 ntBASIC0.21□□□□□ -2.38
LTN1O94822 RNU6-348P-201ENST00000384386 107 ntBASIC0.21□□□□□ -2.38
LTN1O94822 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
LTN1O94822 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.21□□□□□ -2.38
LTN1O94822 AC018868.1-201ENST00000491307 315 ntBASIC0.21□□□□□ -2.38
LTN1O94822 AC090142.3-201ENST00000519012 385 ntBASIC0.21□□□□□ -2.38
LTN1O94822 AC021851.1-201ENST00000608537 1082 ntBASIC0.21□□□□□ -2.38
LTN1O94822 MIR8063-201ENST00000621930 81 ntBASIC0.21□□□□□ -2.38
LTN1O94822 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.21□□□□□ -2.38
LTN1O94822 MTND5P31-201ENST00000419366 1374 ntBASIC0.21□□□□□ -2.38
LTN1O94822 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
LTN1O94822 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.2□□□□□ -2.38
LTN1O94822 Z82210.1-201ENST00000440037 231 ntBASIC0.2□□□□□ -2.38
LTN1O94822 GAPDHP17-201ENST00000449858 1001 ntBASIC0.2□□□□□ -2.38
LTN1O94822 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
LTN1O94822 HMGN1P13-201ENST00000505795 138 ntBASIC0.2□□□□□ -2.38
LTN1O94822 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.2□□□□□ -2.38
LTN1O94822 SMURF2P1-201ENST00000514992 481 ntBASIC0.2□□□□□ -2.38
LTN1O94822 RNA5SP134-201ENST00000516492 96 ntBASIC0.2□□□□□ -2.38
LTN1O94822 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.2□□□□□ -2.38
LTN1O94822 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.2□□□□□ -2.38
LTN1O94822 BBIP1P1-201ENST00000602999 279 ntBASIC0.2□□□□□ -2.38
LTN1O94822 AL713866.2-201ENST00000603579 219 ntBASIC0.2□□□□□ -2.38
LTN1O94822 AC016542.1-201ENST00000608259 493 ntBASIC0.2□□□□□ -2.38
LTN1O94822 AL109659.3-201ENST00000624985 950 ntBASIC0.2□□□□□ -2.38
LTN1O94822 Z75746.1-201ENST00000440243 2080 ntBASIC0.2□□□□□ -2.38
LTN1O94822 RNU6-884P-201ENST00000363889 107 ntBASIC0.19□□□□□ -2.38
LTN1O94822 RNU6-31P-201ENST00000384388 108 ntBASIC0.19□□□□□ -2.38
LTN1O94822 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.19□□□□□ -2.38
LTN1O94822 RPL31P3-201ENST00000458430 332 ntBASIC0.19□□□□□ -2.38
LTN1O94822 RNU4-77P-201ENST00000516692 156 ntBASIC0.19□□□□□ -2.38
LTN1O94822 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.19□□□□□ -2.38
LTN1O94822 AC008088.1-201ENST00000580993 280 ntBASIC0.19□□□□□ -2.38
LTN1O94822 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
LTN1O94822 AC068790.6-201ENST00000602558 258 ntBASIC0.19□□□□□ -2.38
LTN1O94822 MIR6516-201ENST00000630554 81 ntBASIC0.19□□□□□ -2.38
LTN1O94822 AC009950.2-201ENST00000636548 183 ntBASIC0.19□□□□□ -2.38
LTN1O94822 RNU6-441P-201ENST00000384545 106 ntBASIC0.19□□□□□ -2.38
LTN1O94822 MIR1262-201ENST00000408276 93 ntBASIC0.19□□□□□ -2.38
LTN1O94822 RSL24D1P8-201ENST00000434442 492 ntBASIC0.19□□□□□ -2.38
LTN1O94822 AC098831.1-201ENST00000440661 216 ntBASIC0.19□□□□□ -2.38
LTN1O94822 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.19□□□□□ -2.38
LTN1O94822 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.19□□□□□ -2.38
LTN1O94822 BET1P1-201ENST00000482276 359 ntBASIC0.19□□□□□ -2.38
LTN1O94822 SNORA25.11-201ENST00000515935 105 ntBASIC0.19□□□□□ -2.38
LTN1O94822 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.19□□□□□ -2.38
LTN1O94822 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.19□□□□□ -2.38
LTN1O94822 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0.19□□□□□ -2.38
LTN1O94822 AC136619.2-201ENST00000563361 631 ntBASIC0.19□□□□□ -2.38
LTN1O94822 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.19□□□□□ -2.38
LTN1O94822 AP005229.2-201ENST00000609980 697 ntBASIC0.19□□□□□ -2.38
LTN1O94822 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
LTN1O94822 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.19□□□□□ -2.38
LTN1O94822 AC040168.1-201ENST00000623594 991 ntBASIC0.19□□□□□ -2.38
LTN1O94822 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
LTN1O94822 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
LTN1O94822 Y_RNA.255-201ENST00000364581 97 ntBASIC0.18□□□□□ -2.38
LTN1O94822 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.18□□□□□ -2.38
LTN1O94822 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.18□□□□□ -2.38
LTN1O94822 HSPE1P9-201ENST00000440046 311 ntBASIC0.18□□□□□ -2.38
LTN1O94822 RPL26P6-201ENST00000440913 438 ntBASIC0.18□□□□□ -2.38
LTN1O94822 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.18□□□□□ -2.38
LTN1O94822 RNU6-488P-201ENST00000515918 99 ntBASIC0.18□□□□□ -2.38
LTN1O94822 CYCSP27-201ENST00000527643 293 ntBASIC0.18□□□□□ -2.38
LTN1O94822 AC018618.2-201ENST00000604770 446 ntBASIC0.18□□□□□ -2.38
LTN1O94822 Y_RNA.136-201ENST00000363444 102 ntBASIC0.17□□□□□ -2.38
LTN1O94822 AC078974.1-201ENST00000411597 223 ntBASIC0.17□□□□□ -2.38
LTN1O94822 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.17□□□□□ -2.38
LTN1O94822 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.17□□□□□ -2.38
LTN1O94822 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.17□□□□□ -2.38
LTN1O94822 TRAV32-201ENST00000553993 340 ntBASIC0.17□□□□□ -2.38
LTN1O94822 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
LTN1O94822 AC093913.1-201ENST00000614178 329 ntBASIC0.17□□□□□ -2.38
LTN1O94822 RNU6-1237P-201ENST00000384777 107 ntBASIC0.17□□□□□ -2.38
LTN1O94822 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.17□□□□□ -2.38
LTN1O94822 MTCYBP32-201ENST00000427945 1084 ntBASIC0.17□□□□□ -2.38
LTN1O94822 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.17□□□□□ -2.38
LTN1O94822 HMGN3P1-201ENST00000453847 193 ntBASIC0.17□□□□□ -2.38
LTN1O94822 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.17□□□□□ -2.38
LTN1O94822 AC074344.1-201ENST00000512823 224 ntBASIC0.17□□□□□ -2.38
LTN1O94822 RNU6-197P-201ENST00000516680 100 ntBASIC0.17□□□□□ -2.38
LTN1O94822 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.17□□□□□ -2.38
LTN1O94822 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.17□□□□□ -2.38
LTN1O94822 AL138713.1-201ENST00000624026 2130 ntBASIC0.16□□□□□ -2.38
LTN1O94822 MTND4P14-201ENST00000435799 1354 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms