Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 RNU6-412P-201ENST00000516434 106 ntBASIC4.72□□□□□ -1.65
H3BM21 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.72□□□□□ -1.65
H3BM21 AC209154.1-201ENST00000582156 337 ntBASIC4.72□□□□□ -1.65
H3BM21 RN7SL435P-201ENST00000584418 282 ntBASIC4.72□□□□□ -1.65
H3BM21 AL138963.2-201ENST00000605137 226 ntBASIC4.72□□□□□ -1.65
H3BM21 AC015914.2-201ENST00000618167 288 ntBASIC4.72□□□□□ -1.65
H3BM21 AC134878.1-201ENST00000619901 243 ntBASIC4.72□□□□□ -1.65
H3BM21 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
H3BM21 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.72□□□□□ -1.65
H3BM21 AC005332.5-201ENST00000591222 2919 ntBASIC4.72□□□□□ -1.65
H3BM21 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
H3BM21 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
H3BM21 AC007390.2-201ENST00000606229 3803 ntBASIC4.71□□□□□ -1.65
H3BM21 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
H3BM21 AC010329.5-201ENST00000623497 2174 ntBASIC4.71□□□□□ -1.65
H3BM21 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
H3BM21 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
H3BM21 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
H3BM21 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
H3BM21 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
H3BM21 U8.1-201ENST00000362843 134 ntBASIC4.71□□□□□ -1.66
H3BM21 RNU6-1048P-201ENST00000364054 107 ntBASIC4.71□□□□□ -1.66
H3BM21 Y_RNA.287-201ENST00000364853 94 ntBASIC4.71□□□□□ -1.66
H3BM21 SNORA71.2-201ENST00000364941 134 ntBASIC4.71□□□□□ -1.66
H3BM21 SNORA51.10-201ENST00000384418 136 ntBASIC4.71□□□□□ -1.66
H3BM21 Y_RNA.498-201ENST00000384460 102 ntBASIC4.71□□□□□ -1.66
H3BM21 MIR450A2-201ENST00000385022 100 ntBASIC4.71□□□□□ -1.66
H3BM21 ENSAP1-201ENST00000392855 326 ntBASIC4.71□□□□□ -1.66
H3BM21 AL606845.1-201ENST00000404881 255 ntBASIC4.71□□□□□ -1.66
H3BM21 RN7SKP267-201ENST00000410381 285 ntBASIC4.71□□□□□ -1.66
H3BM21 AC009963.1-201ENST00000417265 157 ntBASIC4.71□□□□□ -1.66
H3BM21 AC016712.1-201ENST00000431088 378 ntBASIC4.71□□□□□ -1.66
H3BM21 AL135790.2-201ENST00000437701 267 ntBASIC4.71□□□□□ -1.66
H3BM21 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.71□□□□□ -1.66
H3BM21 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.71□□□□□ -1.66
H3BM21 RNU6-970P-201ENST00000516312 107 ntBASIC4.71□□□□□ -1.66
H3BM21 SNORA31.22-201ENST00000517204 135 ntBASIC4.71□□□□□ -1.66
H3BM21 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.71□□□□□ -1.66
H3BM21 MIR4512-201ENST00000583257 77 ntBASIC4.71□□□□□ -1.66
H3BM21 AC010999.1-201ENST00000611856 324 ntBASIC4.71□□□□□ -1.66
H3BM21 AC099654.7-201ENST00000635788 2127 ntBASIC4.71□□□□□ -1.66
H3BM21 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.71□□□□□ -1.66
H3BM21 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
H3BM21 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H3BM21 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
H3BM21 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
H3BM21 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.7□□□□□ -1.66
H3BM21 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.7□□□□□ -1.66
H3BM21 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
H3BM21 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.7□□□□□ -1.66
H3BM21 RNU6-78P-201ENST00000362897 107 ntBASIC4.7□□□□□ -1.66
H3BM21 U3.9-201ENST00000363823 204 ntBASIC4.7□□□□□ -1.66
H3BM21 RNU6-1107P-201ENST00000364817 104 ntBASIC4.7□□□□□ -1.66
H3BM21 Y_RNA.346-201ENST00000365385 112 ntBASIC4.7□□□□□ -1.66
H3BM21 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
H3BM21 RNU6-142P-201ENST00000384019 107 ntBASIC4.7□□□□□ -1.66
H3BM21 RNU6-1228P-201ENST00000391014 107 ntBASIC4.7□□□□□ -1.66
H3BM21 Y_RNA.617-201ENST00000410920 90 ntBASIC4.7□□□□□ -1.66
H3BM21 MLLT10P1-201ENST00000418346 262 ntBASIC4.7□□□□□ -1.66
H3BM21 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.7□□□□□ -1.66
H3BM21 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.7□□□□□ -1.66
H3BM21 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.7□□□□□ -1.66
H3BM21 AC009963.2-201ENST00000453431 138 ntBASIC4.7□□□□□ -1.66
H3BM21 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.7□□□□□ -1.66
H3BM21 RN7SL385P-201ENST00000468873 276 ntBASIC4.7□□□□□ -1.66
H3BM21 RNU6-781P-201ENST00000516377 101 ntBASIC4.7□□□□□ -1.66
H3BM21 RNU6-521P-201ENST00000516663 105 ntBASIC4.7□□□□□ -1.66
H3BM21 AC074050.1-201ENST00000563247 211 ntBASIC4.7□□□□□ -1.66
H3BM21 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.7□□□□□ -1.66
H3BM21 AC015720.1-201ENST00000565251 277 ntBASIC4.7□□□□□ -1.66
H3BM21 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.7□□□□□ -1.66
H3BM21 MIR5699-201ENST00000578903 90 ntBASIC4.7□□□□□ -1.66
H3BM21 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.7□□□□□ -1.66
H3BM21 AL023881.1-201ENST00000621088 301 ntBASIC4.7□□□□□ -1.66
H3BM21 AC241585.2-209ENST00000638217 143 ntBASIC4.7□□□□□ -1.66
H3BM21 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.7□□□□□ -1.66
H3BM21 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H3BM21 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H3BM21 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
H3BM21 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
H3BM21 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H3BM21 AL136360.1-201ENST00000503377 1900 ntBASIC4.7□□□□□ -1.66
H3BM21 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
H3BM21 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.69□□□□□ -1.66
H3BM21 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
H3BM21 SAGE2P-201ENST00000420011 2126 ntBASIC4.69□□□□□ -1.66
H3BM21 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
H3BM21 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.69□□□□□ -1.66
H3BM21 RNU6-942P-201ENST00000363002 107 ntBASIC4.69□□□□□ -1.66
H3BM21 RNU6-1167P-201ENST00000363227 94 ntBASIC4.69□□□□□ -1.66
H3BM21 RNU6-105P-201ENST00000363909 104 ntBASIC4.69□□□□□ -1.66
H3BM21 Y_RNA.221-201ENST00000364248 96 ntBASIC4.69□□□□□ -1.66
H3BM21 RNU6-1074P-201ENST00000383995 104 ntBASIC4.69□□□□□ -1.66
H3BM21 SNORA51.5-201ENST00000384126 131 ntBASIC4.69□□□□□ -1.66
H3BM21 SNORA70F-201ENST00000384142 135 ntBASIC4.69□□□□□ -1.66
H3BM21 MIR526A2-201ENST00000390198 65 ntBASIC4.69□□□□□ -1.66
H3BM21 MIR1271-201ENST00000408537 86 ntBASIC4.69□□□□□ -1.66
H3BM21 U6atac.2-201ENST00000408644 118 ntBASIC4.69□□□□□ -1.66
H3BM21 RNA5SP44-201ENST00000410446 133 ntBASIC4.69□□□□□ -1.66
H3BM21 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms