Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AC023043.2-201ENST00000589678 1026 ntBASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 AC073413.2-201ENST00000604332 360 ntBASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 AL078604.3-201ENST00000615580 211 ntBASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 AC123767.1-202ENST00000620407 817 ntBASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 AL512643.1-201ENST00000635735 524 ntBASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV4A0A0B4J268 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 SNORA62.1-201ENST00000364287 154 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 RNU4-91P-201ENST00000364778 135 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 SNORA70.7-201ENST00000384159 133 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 RNU6-278P-201ENST00000390945 109 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 RNA5SP213-201ENST00000391031 106 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 SNORA17.3-201ENST00000391159 129 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 MIR1285-1-201ENST00000408593 84 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 RNU4-62P-201ENST00000410125 130 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 RPS12P24-201ENST00000412619 387 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 MRPL35P3-201ENST00000421557 364 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 AC027119.1-201ENST00000440877 241 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 NEFMP1-201ENST00000443423 1006 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 RPS29P28-201ENST00000446439 141 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 RNU6-953P-201ENST00000459154 107 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 RNU7-95P-201ENST00000459222 64 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 RPL30P1-201ENST00000488676 339 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 RPL36AP21-201ENST00000490372 323 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 RNU6-334P-201ENST00000517072 102 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 AC090821.2-201ENST00000523552 176 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 AC090115.3-201ENST00000553218 849 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 RPS3AP4-201ENST00000555161 764 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 MIR3169-201ENST00000578032 83 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 MIR4293-201ENST00000584305 78 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 RPL21P136-201ENST00000605378 396 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 AC025754.2-201ENST00000606491 432 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 uc_338.12-201ENST00000616344 181 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 AC005858.4-201ENST00000623191 700 ntBASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.86□□□□□ -2.27
TRAV4A0A0B4J268 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 DDX43P2-201ENST00000604753 1354 ntBASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 MIR302D-201ENST00000362275 68 ntBASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 RNU6-701P-201ENST00000384059 107 ntBASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 AL603865.2-201ENST00000401679 213 ntBASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 JTBP1-201ENST00000441314 247 ntBASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 AC003071.1-201ENST00000451219 789 ntBASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 AC027338.1-201ENST00000514840 825 ntBASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 RNU6-991P-201ENST00000516168 107 ntBASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 MTND1P36-201ENST00000522384 936 ntBASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 AC026616.1-201ENST00000523157 525 ntBASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 AC087441.2-201ENST00000529141 262 ntBASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 AC087897.1-201ENST00000550134 156 ntBASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 AC137800.2-201ENST00000574375 120 ntBASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 HSPE1P19-201ENST00000603327 295 ntBASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 AP000860.1-201ENST00000605250 559 ntBASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 AL353770.2-201ENST00000620024 78 ntBASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
TRAV4A0A0B4J268 RNU6-112P-201ENST00000363599 104 ntBASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 SNORA22-201ENST00000383907 134 ntBASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 SNORA22C-201ENST00000384614 134 ntBASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 MTND3P20-201ENST00000407663 186 ntBASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 SNORA11.2-201ENST00000408318 127 ntBASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 AC009518.2-201ENST00000418056 731 ntBASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 AL591704.2-201ENST00000421658 181 ntBASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 AL953862.1-201ENST00000423016 168 ntBASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 UBE2V1P8-201ENST00000437166 265 ntBASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 RPL26P26-201ENST00000480251 434 ntBASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 RNU7-40P-201ENST00000516397 64 ntBASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 RN7SKP219-201ENST00000516825 296 ntBASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 CR383656.8-201ENST00000549046 145 ntBASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 AL132657.2-201ENST00000564417 358 ntBASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 MIR4295-201ENST00000585286 85 ntBASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 AL358072.1-201ENST00000604156 575 ntBASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 AL157834.3-201ENST00000615543 103 ntBASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 AL136313.1-201ENST00000624804 202 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms