Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA11Q9Y5H2 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 RNU4-80P-201ENST00000363200 141 ntBASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 Y_RNA.272-201ENST00000364696 102 ntBASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 SNORD50B-201ENST00000364995 70 ntBASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 Y_RNA.343-201ENST00000365354 112 ntBASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 AL590762.2-201ENST00000395798 571 ntBASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 RNA5SP475-201ENST00000410568 110 ntBASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 ELOCP19-201ENST00000411919 318 ntBASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 CRYBB2P1-203ENST00000415709 538 ntBASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 BPY2DP-201ENST00000422208 265 ntBASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 AL645608.4-201ENST00000423619 154 ntBASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 RAB28P5-201ENST00000427490 651 ntBASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 AC140059.1-201ENST00000489238 361 ntBASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 RNU6-155P-201ENST00000516347 100 ntBASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 AC055872.1-201ENST00000570978 278 ntBASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 RBBP8P1-201ENST00000449447 1844 ntBASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA11Q9Y5H2 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 EI24P2-201ENST00000397776 1076 ntBASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 AC099548.1-201ENST00000421443 426 ntBASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 DNAJC19P7-201ENST00000428811 344 ntBASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 AC010469.1-201ENST00000463864 576 ntBASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 ACA59.2-201ENST00000517061 156 ntBASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 CYP4A27P-201ENST00000567218 190 ntBASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 MIR3690-201ENST00000580266 75 ntBASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 MIR3136-201ENST00000583498 78 ntBASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 AL133393.1-201ENST00000603277 287 ntBASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 SNRPGP20-201ENST00000604477 205 ntBASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
PCDHGA11Q9Y5H2 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 AC007656.2-201ENST00000624902 4547 ntBASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 RNU1-62P-201ENST00000362599 164 ntBASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 RNU6-653P-201ENST00000363074 106 ntBASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 Y_RNA.101-201ENST00000363154 102 ntBASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 RNU6-622P-201ENST00000384272 103 ntBASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 Y_RNA.571-201ENST00000384753 98 ntBASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 MIR105-2-201ENST00000385083 81 ntBASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 COX6B1P1-201ENST00000415962 213 ntBASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 AC090525.1-201ENST00000479116 478 ntBASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 RPS29P20-201ENST00000489592 171 ntBASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 AC091868.1-201ENST00000508746 304 ntBASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 RNU6-928P-201ENST00000516876 104 ntBASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 ATP5J2P6-201ENST00000565203 266 ntBASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 MIR4646-201ENST00000580775 63 ntBASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 AC006380.1-201ENST00000603598 186 ntBASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 AC073308.1-201ENST00000623696 305 ntBASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 AC091932.3-201ENST00000624223 323 ntBASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms