Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MIR6891-201ENST00000618788 93 ntBASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 MIR6075-201ENST00000620782 95 ntBASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 AC106754.2-201ENST00000623006 233 ntBASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.57□□□□□ -1.52
PDZRN3Q9UPQ7 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 RNU6-235P-201ENST00000362644 107 ntBASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 RNA5SP307-201ENST00000362863 116 ntBASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 RNU6-640P-201ENST00000363693 105 ntBASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 RNU6-20P-201ENST00000384106 107 ntBASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 MIR554-201ENST00000384874 96 ntBASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 RNU6-578P-201ENST00000390980 103 ntBASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 RNU6-381P-201ENST00000391259 108 ntBASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 U3.29-201ENST00000391296 212 ntBASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 VN1R105P-201ENST00000486595 910 ntBASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 SNORD116-26-201ENST00000516006 96 ntBASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 RNU6-772P-201ENST00000516042 105 ntBASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 RNU6-191P-201ENST00000516295 94 ntBASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 TRAV8-5-201ENST00000537369 341 ntBASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 RPL23AP97-201ENST00000568955 471 ntBASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 AC079587.1-201ENST00000603846 277 ntBASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 AL138721.1-201ENST00000616756 179 ntBASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 AC007546.2-201ENST00000623996 360 ntBASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 AC000123.3-201ENST00000624029 4975 ntBASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDZRN3Q9UPQ7 AC092593.1-201ENST00000515413 1815 ntBASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 RNU6-288P-201ENST00000363690 104 ntBASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 RNU6-49P-201ENST00000384256 107 ntBASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 SNORD116-21-201ENST00000384507 92 ntBASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 SNORD37.2-201ENST00000391075 66 ntBASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 LAP3P1-201ENST00000403648 294 ntBASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 CEACAMP1-201ENST00000434624 1035 ntBASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 RPS15AP7-201ENST00000439294 405 ntBASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 GEMIN8P3-201ENST00000445417 720 ntBASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 AC109327.2-201ENST00000448339 378 ntBASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 AL162389.1-201ENST00000449233 177 ntBASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 RPS27AP13-201ENST00000498403 237 ntBASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 RNU6-567P-201ENST00000516746 107 ntBASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 AL596275.2-206ENST00000641957 626 ntBASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 AL592182.3-201ENST00000642132 3304 ntBASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 Z73965.1-201ENST00000623412 2297 ntBASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.55□□□□□ -1.52
PDZRN3Q9UPQ7 MAPK10-320ENST00000641462 6696 ntBASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 RNU6-1272P-201ENST00000362776 107 ntBASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 RNA5SP197-201ENST00000363357 119 ntBASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 RNU6-879P-201ENST00000364328 108 ntBASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 RNU6-1131P-201ENST00000364955 107 ntBASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 AL591034.1-201ENST00000407447 340 ntBASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 RNU4-65P-201ENST00000410473 140 ntBASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 AL096701.2-201ENST00000416920 238 ntBASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 AL356095.1-201ENST00000417217 199 ntBASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 RPS15AP5-201ENST00000436276 388 ntBASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 RPS20P10-201ENST00000451209 253 ntBASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 RPS29P27-201ENST00000463711 170 ntBASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 RNU1-86P-201ENST00000516108 154 ntBASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 RNU1-107P-201ENST00000516617 154 ntBASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 SNRPGP16-201ENST00000533275 226 ntBASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 MIR3121-201ENST00000579680 77 ntBASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 MIR4744-201ENST00000581563 82 ntBASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 AL354798.1-201ENST00000622505 329 ntBASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.54□□□□□ -1.52
PDZRN3Q9UPQ7 ZNF204P-201ENST00000416749 2397 ntBASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 AC007390.2-201ENST00000606229 3803 ntBASIC5.53□□□□□ -1.52
PDZRN3Q9UPQ7 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms