Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
FOXD3Q9UJU5 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.22□□□□□ -1.73
FOXD3Q9UJU5 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.21□□□□□ -1.73
FOXD3Q9UJU5 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.21□□□□□ -1.73
FOXD3Q9UJU5 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
FOXD3Q9UJU5 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 SNORA71.2-201ENST00000364941 134 ntBASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 Y_RNA.383-201ENST00000383855 97 ntBASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 SNORA19-201ENST00000384737 128 ntBASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 AL590762.2-201ENST00000395798 571 ntBASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 Z98745.1-201ENST00000402553 494 ntBASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 RPL19P1-201ENST00000411635 428 ntBASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 CYCSP48-201ENST00000417124 323 ntBASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 AC010095.1-201ENST00000443543 144 ntBASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 SNORD2.1-201ENST00000458762 69 ntBASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 AC091868.1-201ENST00000508746 304 ntBASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 RNU6-861P-201ENST00000516745 106 ntBASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 MIR3133-201ENST00000583157 78 ntBASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 KLKP1-201ENST00000595979 403 ntBASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 AC010620.2-201ENST00000600135 313 ntBASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 AL356218.2-201ENST00000605264 187 ntBASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
FOXD3Q9UJU5 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 AC004944.1-201ENST00000517807 3059 ntBASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 BX322639.1-202ENST00000423987 2213 ntBASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 Y_RNA.418-201ENST00000384029 102 ntBASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 AC019205.3-201ENST00000424573 156 ntBASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 AC005300.1-201ENST00000428401 373 ntBASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 FTH1P6-201ENST00000430768 320 ntBASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 SETP5-201ENST00000437270 562 ntBASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 HMGN2P16-201ENST00000456802 261 ntBASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 RPL30P12-201ENST00000474666 353 ntBASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 AC015795.1-201ENST00000513669 327 ntBASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 SNORD19.2-201ENST00000516978 73 ntBASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 AC105129.1-201ENST00000560250 297 ntBASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 MIR4715-201ENST00000584117 79 ntBASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 MIR8069-1-201ENST00000616627 86 ntBASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 AC073349.3-201ENST00000617616 186 ntBASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 MIR8069-2-201ENST00000621412 86 ntBASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 AC048347.1-201ENST00000624621 427 ntBASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
FOXD3Q9UJU5 NEAT1-202ENST00000501122 22743 ntBASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 AF117829.1-206ENST00000621883 3802 ntBASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 Y_RNA.179-201ENST00000363844 90 ntBASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 RNU4-56P-201ENST00000364700 142 ntBASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 RNU6-1289P-201ENST00000384431 106 ntBASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 RPL23AP82-202ENST00000427528 469 ntBASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 RPL23AP1-201ENST00000428990 471 ntBASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 AL161651.1-201ENST00000440882 223 ntBASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 AC079168.2-201ENST00000453977 416 ntBASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 RPL23AP81-201ENST00000455252 467 ntBASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 AC109925.1-201ENST00000478069 331 ntBASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 RPL32P34-201ENST00000486380 400 ntBASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 CYP4A27P-201ENST00000567218 190 ntBASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 AL078605.1-201ENST00000603529 500 ntBASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 AC024220.1-201ENST00000603675 484 ntBASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 AL357075.2-201ENST00000614906 189 ntBASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 MIR6076-201ENST00000617521 113 ntBASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 U6.106-201ENST00000636360 105 ntBASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.19□□□□□ -1.74
FOXD3Q9UJU5 MTND5P35-201ENST00000557537 1720 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 SNORA72.2-201ENST00000365028 127 ntBASIC4.18□□□□□ -1.74
FOXD3Q9UJU5 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms