Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC073410.2-201ENST00000603240 332 ntBASIC0.28□□□□□ -2.37
CHD8Q9HCK8 AC069294.1-201ENST00000608397 350 ntBASIC0.28□□□□□ -2.37
CHD8Q9HCK8 AL121890.5-201ENST00000620848 304 ntBASIC0.28□□□□□ -2.37
CHD8Q9HCK8 Z99571.1-201ENST00000636677 394 ntBASIC0.28□□□□□ -2.37
CHD8Q9HCK8 RNU6-271P-201ENST00000363858 105 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 RNU4-9P-201ENST00000364951 139 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 MT-TC-201ENST00000387405 66 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 RNU6-575P-201ENST00000411326 105 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 RPL22P18-201ENST00000417197 377 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.27□□□□□ -2.37
CHD8Q9HCK8 AC104629.2-201ENST00000468627 598 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 Y_RNA.711-201ENST00000516993 102 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 AC087897.1-201ENST00000550134 156 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 AL021879.1-201ENST00000611756 288 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.27□□□□□ -2.37
CHD8Q9HCK8 SNORD114-28-201ENST00000363610 72 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 Y_RNA.352-201ENST00000365439 102 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 SNORA32.3-201ENST00000384772 121 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 MIR29C-201ENST00000385231 88 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 AL139098.1-201ENST00000407291 389 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 ARPC3P5-201ENST00000448802 534 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 AC087477.1-201ENST00000465747 340 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 RNU6-27P-201ENST00000516146 107 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 AC008562.1-201ENST00000521763 330 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.27□□□□□ -2.37
CHD8Q9HCK8 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.27□□□□□ -2.37
CHD8Q9HCK8 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.27□□□□□ -2.37
CHD8Q9HCK8 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.27□□□□□ -2.37
CHD8Q9HCK8 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.27□□□□□ -2.37
CHD8Q9HCK8 AC125611.1-201ENST00000549563 229 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 AC009233.1-201ENST00000616477 371 ntBASIC0.27□□□□□ -2.37
CHD8Q9HCK8 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.26□□□□□ -2.37
CHD8Q9HCK8 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.26□□□□□ -2.37
CHD8Q9HCK8 RPS27P16-201ENST00000425758 201 ntBASIC0.26□□□□□ -2.37
CHD8Q9HCK8 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC0.26□□□□□ -2.37
CHD8Q9HCK8 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.26□□□□□ -2.37
CHD8Q9HCK8 HSPE1P13-201ENST00000451143 297 ntBASIC0.26□□□□□ -2.37
CHD8Q9HCK8 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.26□□□□□ -2.37
CHD8Q9HCK8 AC093027.1-201ENST00000546698 429 ntBASIC0.26□□□□□ -2.37
CHD8Q9HCK8 MIR3681-201ENST00000580089 72 ntBASIC0.26□□□□□ -2.37
CHD8Q9HCK8 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.26□□□□□ -2.37
CHD8Q9HCK8 AC105224.1-201ENST00000587055 421 ntBASIC0.26□□□□□ -2.37
CHD8Q9HCK8 AC018618.2-201ENST00000604770 446 ntBASIC0.26□□□□□ -2.37
CHD8Q9HCK8 AL162730.1-201ENST00000605734 292 ntBASIC0.26□□□□□ -2.37
CHD8Q9HCK8 AC009318.4-201ENST00000620496 486 ntBASIC0.26□□□□□ -2.37
CHD8Q9HCK8 RNU2-36P-201ENST00000410361 191 ntBASIC0.26□□□□□ -2.37
CHD8Q9HCK8 AC096920.1-201ENST00000423991 241 ntBASIC0.26□□□□□ -2.37
CHD8Q9HCK8 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.26□□□□□ -2.37
CHD8Q9HCK8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.26□□□□□ -2.37
CHD8Q9HCK8 AP003122.4-201ENST00000530980 758 ntBASIC0.26□□□□□ -2.37
CHD8Q9HCK8 AC009268.1-201ENST00000561352 1203 ntBASIC0.26□□□□□ -2.37
CHD8Q9HCK8 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.26□□□□□ -2.37
CHD8Q9HCK8 MTND4P8-201ENST00000514997 1362 ntBASIC0.26□□□□□ -2.37
CHD8Q9HCK8 Y_RNA.117-201ENST00000363294 101 ntBASIC0.25□□□□□ -2.37
CHD8Q9HCK8 RPP40P1-201ENST00000426762 456 ntBASIC0.25□□□□□ -2.37
CHD8Q9HCK8 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.25□□□□□ -2.37
CHD8Q9HCK8 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.25□□□□□ -2.37
CHD8Q9HCK8 AL049830.1-201ENST00000468034 425 ntBASIC0.25□□□□□ -2.37
CHD8Q9HCK8 COX6CP6-201ENST00000490840 228 ntBASIC0.25□□□□□ -2.37
CHD8Q9HCK8 POLR2KP1-201ENST00000553226 168 ntBASIC0.25□□□□□ -2.37
CHD8Q9HCK8 CYP3A52P-201ENST00000563326 91 ntBASIC0.25□□□□□ -2.37
CHD8Q9HCK8 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.25□□□□□ -2.37
CHD8Q9HCK8 AL713866.2-201ENST00000603579 219 ntBASIC0.25□□□□□ -2.37
CHD8Q9HCK8 AP003973.1-201ENST00000604639 691 ntBASIC0.25□□□□□ -2.37
CHD8Q9HCK8 AC007349.4-201ENST00000608114 532 ntBASIC0.25□□□□□ -2.37
CHD8Q9HCK8 Y_RNA.403-201ENST00000383977 101 ntBASIC0.25□□□□□ -2.37
CHD8Q9HCK8 RNU6-152P-201ENST00000384037 107 ntBASIC0.25□□□□□ -2.37
CHD8Q9HCK8 MIR100-201ENST00000385259 80 ntBASIC0.25□□□□□ -2.37
CHD8Q9HCK8 NDUFB4P7-201ENST00000423198 363 ntBASIC0.25□□□□□ -2.37
CHD8Q9HCK8 AC092047.1-201ENST00000424997 240 ntBASIC0.25□□□□□ -2.37
CHD8Q9HCK8 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0.25□□□□□ -2.37
CHD8Q9HCK8 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.25□□□□□ -2.37
CHD8Q9HCK8 AC006512.1-201ENST00000468816 291 ntBASIC0.25□□□□□ -2.37
CHD8Q9HCK8 AC108729.1-201ENST00000487812 947 ntBASIC0.25□□□□□ -2.37
CHD8Q9HCK8 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.25□□□□□ -2.37
CHD8Q9HCK8 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.25□□□□□ -2.37
CHD8Q9HCK8 AC022447.1-201ENST00000515358 464 ntBASIC0.25□□□□□ -2.37
CHD8Q9HCK8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.25□□□□□ -2.37
CHD8Q9HCK8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.25□□□□□ -2.37
CHD8Q9HCK8 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.25□□□□□ -2.37
CHD8Q9HCK8 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.25□□□□□ -2.37
CHD8Q9HCK8 AL049641.1-201ENST00000441055 1948 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
CHD8Q9HCK8 MIR26B-201ENST00000362251 77 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 RNU1-124P-201ENST00000363861 145 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 RNU6-884P-201ENST00000363889 107 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 RNY3P14-201ENST00000384309 102 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 BTF3L4P2-201ENST00000392798 346 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
CHD8Q9HCK8 AC009518.2-201ENST00000418056 731 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 AL590556.1-201ENST00000423231 483 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC0.24□□□□□ -2.37
CHD8Q9HCK8 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.24□□□□□ -2.37
CHD8Q9HCK8 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.24□□□□□ -2.37
CHD8Q9HCK8 MTND1P16-201ENST00000465177 898 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 HMGB1P36-201ENST00000487709 576 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.24□□□□□ -2.37
CHD8Q9HCK8 RNU5A-7P-201ENST00000515979 116 ntBASIC0.24□□□□□ -2.37
CHD8Q9HCK8 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms