Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.38□□□□□ -1.71
CBX8Q9HC52 MIR4300-201ENST00000581016 96 ntBASIC4.38□□□□□ -1.71
CBX8Q9HC52 MIR5096-201ENST00000583713 70 ntBASIC4.38□□□□□ -1.71
CBX8Q9HC52 AL136964.1-201ENST00000622038 2990 ntBASIC4.38□□□□□ -1.71
CBX8Q9HC52 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.38□□□□□ -1.71
CBX8Q9HC52 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CBX8Q9HC52 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
CBX8Q9HC52 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CBX8Q9HC52 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CBX8Q9HC52 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CBX8Q9HC52 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.37□□□□□ -1.71
CBX8Q9HC52 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.37□□□□□ -1.71
CBX8Q9HC52 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CBX8Q9HC52 AC118273.1-201ENST00000525324 3006 ntBASIC4.37□□□□□ -1.71
CBX8Q9HC52 RNU6-525P-201ENST00000363685 104 ntBASIC4.37□□□□□ -1.71
CBX8Q9HC52 SNORD27-201ENST00000363981 72 ntBASIC4.37□□□□□ -1.71
CBX8Q9HC52 Z98749.2-208ENST00000381646 500 ntBASIC4.37□□□□□ -1.71
CBX8Q9HC52 RNU6-338P-201ENST00000383888 105 ntBASIC4.37□□□□□ -1.71
CBX8Q9HC52 Y_RNA.439-201ENST00000384119 94 ntBASIC4.37□□□□□ -1.71
CBX8Q9HC52 SNORA57.1-201ENST00000391227 145 ntBASIC4.37□□□□□ -1.71
CBX8Q9HC52 AL138878.1-201ENST00000405131 347 ntBASIC4.37□□□□□ -1.71
CBX8Q9HC52 AC091286.1-201ENST00000431233 461 ntBASIC4.37□□□□□ -1.71
CBX8Q9HC52 AL513124.1-201ENST00000450410 614 ntBASIC4.37□□□□□ -1.71
CBX8Q9HC52 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.37□□□□□ -1.71
CBX8Q9HC52 snoU13.22-201ENST00000459428 104 ntBASIC4.37□□□□□ -1.71
CBX8Q9HC52 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.37□□□□□ -1.71
CBX8Q9HC52 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.37□□□□□ -1.71
CBX8Q9HC52 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.37□□□□□ -1.71
CBX8Q9HC52 ANXA2P1-201ENST00000505539 926 ntBASIC4.37□□□□□ -1.71
CBX8Q9HC52 SNORA31.6-201ENST00000516241 130 ntBASIC4.37□□□□□ -1.71
CBX8Q9HC52 Y_RNA.706-201ENST00000516933 99 ntBASIC4.37□□□□□ -1.71
CBX8Q9HC52 Y_RNA.713-201ENST00000517013 96 ntBASIC4.37□□□□□ -1.71
CBX8Q9HC52 RNU6-1073P-201ENST00000517182 106 ntBASIC4.37□□□□□ -1.71
CBX8Q9HC52 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.37□□□□□ -1.71
CBX8Q9HC52 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.37□□□□□ -1.71
CBX8Q9HC52 AC053481.4-201ENST00000583164 216 ntBASIC4.37□□□□□ -1.71
CBX8Q9HC52 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.37□□□□□ -1.71
CBX8Q9HC52 AL590392.1-201ENST00000604960 446 ntBASIC4.37□□□□□ -1.71
CBX8Q9HC52 AL356218.2-201ENST00000605264 187 ntBASIC4.37□□□□□ -1.71
CBX8Q9HC52 MIR6868-201ENST00000611215 58 ntBASIC4.37□□□□□ -1.71
CBX8Q9HC52 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.37□□□□□ -1.71
CBX8Q9HC52 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CBX8Q9HC52 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CBX8Q9HC52 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.37□□□□□ -1.71
CBX8Q9HC52 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CBX8Q9HC52 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.36□□□□□ -1.71
CBX8Q9HC52 AL391987.6-201ENST00000305671 199 ntBASIC4.36□□□□□ -1.71
CBX8Q9HC52 MRPL35P1-201ENST00000404272 572 ntBASIC4.36□□□□□ -1.71
CBX8Q9HC52 RNU4-61P-201ENST00000411243 107 ntBASIC4.36□□□□□ -1.71
CBX8Q9HC52 AL358453.1-201ENST00000422522 250 ntBASIC4.36□□□□□ -1.71
CBX8Q9HC52 AC004975.1-201ENST00000428733 208 ntBASIC4.36□□□□□ -1.71
CBX8Q9HC52 Z82188.1-201ENST00000436709 154 ntBASIC4.36□□□□□ -1.71
CBX8Q9HC52 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.36□□□□□ -1.71
CBX8Q9HC52 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.36□□□□□ -1.71
CBX8Q9HC52 RNU7-87P-201ENST00000459343 62 ntBASIC4.36□□□□□ -1.71
CBX8Q9HC52 RPS23P5-201ENST00000495419 428 ntBASIC4.36□□□□□ -1.71
CBX8Q9HC52 Vault.1-201ENST00000516474 102 ntBASIC4.36□□□□□ -1.71
CBX8Q9HC52 RN7SKP83-201ENST00000516512 178 ntBASIC4.36□□□□□ -1.71
CBX8Q9HC52 RNU5B-3P-201ENST00000516601 115 ntBASIC4.36□□□□□ -1.71
CBX8Q9HC52 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CBX8Q9HC52 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.36□□□□□ -1.71
CBX8Q9HC52 MIR376A1-201ENST00000616574 68 ntBASIC4.36□□□□□ -1.71
CBX8Q9HC52 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CBX8Q9HC52 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CBX8Q9HC52 LINC02555-201ENST00000563933 1951 ntBASIC4.36□□□□□ -1.71
CBX8Q9HC52 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.36□□□□□ -1.71
CBX8Q9HC52 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CBX8Q9HC52 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CBX8Q9HC52 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.35□□□□□ -1.71
CBX8Q9HC52 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CBX8Q9HC52 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CBX8Q9HC52 RNU6-140P-201ENST00000384566 108 ntBASIC4.35□□□□□ -1.71
CBX8Q9HC52 SNORA11.1-201ENST00000408133 129 ntBASIC4.35□□□□□ -1.71
CBX8Q9HC52 TMEM167AP1-201ENST00000423409 219 ntBASIC4.35□□□□□ -1.71
CBX8Q9HC52 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.35□□□□□ -1.71
CBX8Q9HC52 MTND5P15-201ENST00000434246 349 ntBASIC4.35□□□□□ -1.71
CBX8Q9HC52 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.35□□□□□ -1.71
CBX8Q9HC52 AC078817.1-201ENST00000492623 435 ntBASIC4.35□□□□□ -1.71
CBX8Q9HC52 Y_RNA.700-201ENST00000516806 100 ntBASIC4.35□□□□□ -1.71
CBX8Q9HC52 AC093023.1-201ENST00000547375 507 ntBASIC4.35□□□□□ -1.71
CBX8Q9HC52 AC034105.4-201ENST00000568304 277 ntBASIC4.35□□□□□ -1.71
CBX8Q9HC52 AC010928.2-201ENST00000588017 287 ntBASIC4.35□□□□□ -1.71
CBX8Q9HC52 AC034229.5-201ENST00000624258 185 ntBASIC4.35□□□□□ -1.71
CBX8Q9HC52 U2.21-201ENST00000637295 81 ntBASIC4.35□□□□□ -1.71
CBX8Q9HC52 U6.99-201ENST00000637524 83 ntBASIC4.35□□□□□ -1.71
CBX8Q9HC52 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
CBX8Q9HC52 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CBX8Q9HC52 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CBX8Q9HC52 SNORD81.1-201ENST00000363064 77 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 RNY1-201ENST00000364228 113 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 Y_RNA.352-201ENST00000365439 102 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
CBX8Q9HC52 RNU6-1279P-201ENST00000383917 103 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 MIR518D-201ENST00000385014 87 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 BTF3L4P2-201ENST00000392798 346 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 U3.37-201ENST00000408528 213 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 AC002075.2-201ENST00000425207 252 ntBASIC4.34□□□□□ -1.71
CBX8Q9HC52 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.34□□□□□ -1.71
CBX8Q9HC52 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms