Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SENP3Q9H4L4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SENP3Q9H4L4 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
SENP3Q9H4L4 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
SENP3Q9H4L4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC8.49□□□□□ -1.05
SENP3Q9H4L4 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SENP3Q9H4L4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SENP3Q9H4L4 SNORD14E-201ENST00000364009 85 ntBASIC8.49□□□□□ -1.05
SENP3Q9H4L4 SNORD115-31-201ENST00000365318 82 ntBASIC8.49□□□□□ -1.05
SENP3Q9H4L4 RN7SKP111-201ENST00000410349 271 ntBASIC8.49□□□□□ -1.05
SENP3Q9H4L4 PSMD10P3-201ENST00000437000 448 ntBASIC8.49□□□□□ -1.05
SENP3Q9H4L4 snoU13.24-201ENST00000458998 104 ntBASIC8.49□□□□□ -1.05
SENP3Q9H4L4 AL035690.1-201ENST00000490892 383 ntBASIC8.49□□□□□ -1.05
SENP3Q9H4L4 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC8.49□□□□□ -1.05
SENP3Q9H4L4 MIR4301-201ENST00000577203 66 ntBASIC8.49□□□□□ -1.05
SENP3Q9H4L4 MIR3189-201ENST00000578735 73 ntBASIC8.49□□□□□ -1.05
SENP3Q9H4L4 AC012493.2-201ENST00000595083 291 ntBASIC8.49□□□□□ -1.05
SENP3Q9H4L4 AC008739.2-201ENST00000597006 317 ntBASIC8.49□□□□□ -1.05
SENP3Q9H4L4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC8.49□□□□□ -1.05
SENP3Q9H4L4 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
SENP3Q9H4L4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC8.49□□□□□ -1.05
SENP3Q9H4L4 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SENP3Q9H4L4 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC8.49□□□□□ -1.05
SENP3Q9H4L4 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC8.49□□□□□ -1.05
SENP3Q9H4L4 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
SENP3Q9H4L4 AC063976.2-201ENST00000425667 3556 ntBASIC8.48□□□□□ -1.05
SENP3Q9H4L4 AC092881.1-201ENST00000638218 2733 ntBASIC8.48□□□□□ -1.05
SENP3Q9H4L4 AL353796.1-201ENST00000561542 3241 ntBASIC8.48□□□□□ -1.05
SENP3Q9H4L4 MIR635-201ENST00000384830 98 ntBASIC8.48□□□□□ -1.05
SENP3Q9H4L4 MIR522-201ENST00000385071 87 ntBASIC8.48□□□□□ -1.05
SENP3Q9H4L4 RN7SL172P-201ENST00000460535 303 ntBASIC8.48□□□□□ -1.05
SENP3Q9H4L4 HMGB1P22-201ENST00000505315 124 ntBASIC8.48□□□□□ -1.05
SENP3Q9H4L4 AL049872.1-201ENST00000556323 322 ntBASIC8.48□□□□□ -1.05
SENP3Q9H4L4 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC8.48□□□□□ -1.05
SENP3Q9H4L4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC8.48□□□□□ -1.05
SENP3Q9H4L4 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
SENP3Q9H4L4 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SENP3Q9H4L4 ZNF658B-201ENST00000602828 3408 ntBASIC8.48□□□□□ -1.05
SENP3Q9H4L4 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
SENP3Q9H4L4 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
SENP3Q9H4L4 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SENP3Q9H4L4 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SENP3Q9H4L4 AL355596.1-201ENST00000565399 3996 ntBASIC8.47□□□□□ -1.05
SENP3Q9H4L4 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
SENP3Q9H4L4 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SENP3Q9H4L4 RNU6-1241P-201ENST00000384536 107 ntBASIC8.47□□□□□ -1.05
SENP3Q9H4L4 RNF10P1-201ENST00000418589 369 ntBASIC8.47□□□□□ -1.05
SENP3Q9H4L4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC8.47□□□□□ -1.05
SENP3Q9H4L4 AC244098.2-201ENST00000422068 99 ntBASIC8.47□□□□□ -1.05
SENP3Q9H4L4 SNRPGP5-201ENST00000456003 220 ntBASIC8.47□□□□□ -1.05
SENP3Q9H4L4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC8.47□□□□□ -1.05
SENP3Q9H4L4 TXNP4-201ENST00000575018 310 ntBASIC8.47□□□□□ -1.05
SENP3Q9H4L4 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
SENP3Q9H4L4 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC8.47□□□□□ -1.05
SENP3Q9H4L4 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SENP3Q9H4L4 AC074141.1-201ENST00000588129 2995 ntBASIC8.46□□□□□ -1.05
SENP3Q9H4L4 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
SENP3Q9H4L4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC8.46□□□□□ -1.05
SENP3Q9H4L4 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.46□□□□□ -1.05
SENP3Q9H4L4 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
SENP3Q9H4L4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
SENP3Q9H4L4 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC8.46□□□□□ -1.06
SENP3Q9H4L4 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SENP3Q9H4L4 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC8.46□□□□□ -1.06
SENP3Q9H4L4 RN7SKP213-201ENST00000410746 298 ntBASIC8.46□□□□□ -1.06
SENP3Q9H4L4 RNU6-615P-201ENST00000516065 106 ntBASIC8.46□□□□□ -1.06
SENP3Q9H4L4 SCARNA3-201ENST00000517097 143 ntBASIC8.46□□□□□ -1.06
SENP3Q9H4L4 MIR8089-201ENST00000620165 82 ntBASIC8.46□□□□□ -1.06
SENP3Q9H4L4 AC068870.2-201ENST00000620635 389 ntBASIC8.46□□□□□ -1.06
SENP3Q9H4L4 CU639417.4-201ENST00000623928 207 ntBASIC8.46□□□□□ -1.06
SENP3Q9H4L4 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
SENP3Q9H4L4 AC006504.1-201ENST00000562493 3666 ntBASIC8.46□□□□□ -1.06
SENP3Q9H4L4 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SENP3Q9H4L4 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
SENP3Q9H4L4 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC8.45□□□□□ -1.06
SENP3Q9H4L4 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SENP3Q9H4L4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SENP3Q9H4L4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SENP3Q9H4L4 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SENP3Q9H4L4 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
SENP3Q9H4L4 MIR181B2-201ENST00000385004 89 ntBASIC8.45□□□□□ -1.06
SENP3Q9H4L4 BMS1P17-202ENST00000416720 316 ntBASIC8.45□□□□□ -1.06
SENP3Q9H4L4 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC8.45□□□□□ -1.06
SENP3Q9H4L4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC8.45□□□□□ -1.06
SENP3Q9H4L4 AL441985.1-201ENST00000457727 251 ntBASIC8.45□□□□□ -1.06
SENP3Q9H4L4 RNU7-2P-201ENST00000516096 62 ntBASIC8.45□□□□□ -1.06
SENP3Q9H4L4 RNU6-90P-201ENST00000606352 106 ntBASIC8.45□□□□□ -1.06
SENP3Q9H4L4 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC8.45□□□□□ -1.06
SENP3Q9H4L4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC8.45□□□□□ -1.06
SENP3Q9H4L4 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SENP3Q9H4L4 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
SENP3Q9H4L4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC8.45□□□□□ -1.06
SENP3Q9H4L4 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
SENP3Q9H4L4 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SENP3Q9H4L4 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SENP3Q9H4L4 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SENP3Q9H4L4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
SENP3Q9H4L4 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SENP3Q9H4L4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SENP3Q9H4L4 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms