Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 RNU6-1328P-201ENST00000410938 106 ntBASIC2.55□□□□□ -2
CPNE1Q99829 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.55□□□□□ -2
CPNE1Q99829 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.55□□□□□ -2
CPNE1Q99829 AC092427.1-202ENST00000430569 476 ntBASIC2.55□□□□□ -2
CPNE1Q99829 MICF-203ENST00000432679 129 ntBASIC2.55□□□□□ -2
CPNE1Q99829 FABP5P14-201ENST00000437273 393 ntBASIC2.55□□□□□ -2
CPNE1Q99829 CALM1P1-201ENST00000442082 433 ntBASIC2.55□□□□□ -2
CPNE1Q99829 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.55□□□□□ -2
CPNE1Q99829 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.55□□□□□ -2
CPNE1Q99829 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.55□□□□□ -2
CPNE1Q99829 AL121769.1-201ENST00000469473 401 ntBASIC2.55□□□□□ -2
CPNE1Q99829 MED28P2-201ENST00000475771 317 ntBASIC2.55□□□□□ -2
CPNE1Q99829 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
CPNE1Q99829 AC019235.1-201ENST00000503847 207 ntBASIC2.55□□□□□ -2
CPNE1Q99829 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.55□□□□□ -2
CPNE1Q99829 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.55□□□□□ -2
CPNE1Q99829 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.55□□□□□ -2
CPNE1Q99829 RNU5B-3P-201ENST00000516601 115 ntBASIC2.55□□□□□ -2
CPNE1Q99829 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.55□□□□□ -2
CPNE1Q99829 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.55□□□□□ -2
CPNE1Q99829 MTND4P7-201ENST00000523876 130 ntBASIC2.55□□□□□ -2
CPNE1Q99829 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.55□□□□□ -2
CPNE1Q99829 AC243972.3-201ENST00000539655 198 ntBASIC2.55□□□□□ -2
CPNE1Q99829 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.55□□□□□ -2
CPNE1Q99829 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.55□□□□□ -2
CPNE1Q99829 AL512360.1-201ENST00000555346 234 ntBASIC2.55□□□□□ -2
CPNE1Q99829 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.55□□□□□ -2
CPNE1Q99829 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.55□□□□□ -2
CPNE1Q99829 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.55□□□□□ -2
CPNE1Q99829 AC138761.3-201ENST00000579993 334 ntBASIC2.55□□□□□ -2
CPNE1Q99829 MIR3941-201ENST00000582572 103 ntBASIC2.55□□□□□ -2
CPNE1Q99829 AC012557.2-201ENST00000605919 418 ntBASIC2.55□□□□□ -2
CPNE1Q99829 RNU6-91P-201ENST00000607774 107 ntBASIC2.55□□□□□ -2
CPNE1Q99829 AC093788.1-201ENST00000609356 927 ntBASIC2.55□□□□□ -2
CPNE1Q99829 uc_338.34-201ENST00000617467 174 ntBASIC2.55□□□□□ -2
CPNE1Q99829 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.55□□□□□ -2
CPNE1Q99829 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.55□□□□□ -2
CPNE1Q99829 MIR7157-201ENST00000635801 60 ntBASIC2.55□□□□□ -2
CPNE1Q99829 MIR3529-201ENST00000637713 78 ntBASIC2.55□□□□□ -2
CPNE1Q99829 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CPNE1Q99829 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CPNE1Q99829 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.55□□□□□ -2
CPNE1Q99829 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CPNE1Q99829 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.55□□□□□ -2
CPNE1Q99829 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.55□□□□□ -2
CPNE1Q99829 MAPK10-266ENST00000641066 6555 ntBASIC2.54□□□□□ -2
CPNE1Q99829 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
CPNE1Q99829 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.54□□□□□ -2
CPNE1Q99829 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CPNE1Q99829 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CPNE1Q99829 SNORD46.1-201ENST00000364139 104 ntBASIC2.54□□□□□ -2
CPNE1Q99829 Y_RNA.324-201ENST00000365165 102 ntBASIC2.54□□□□□ -2
CPNE1Q99829 SNORA69-201ENST00000383895 132 ntBASIC2.54□□□□□ -2
CPNE1Q99829 SNORD37.1-201ENST00000390968 65 ntBASIC2.54□□□□□ -2
CPNE1Q99829 AL139095.1-201ENST00000404326 391 ntBASIC2.54□□□□□ -2
CPNE1Q99829 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.54□□□□□ -2
CPNE1Q99829 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.54□□□□□ -2
CPNE1Q99829 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.54□□□□□ -2
CPNE1Q99829 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.54□□□□□ -2
CPNE1Q99829 Z98742.2-201ENST00000431564 187 ntBASIC2.54□□□□□ -2
CPNE1Q99829 AL365400.1-201ENST00000431854 640 ntBASIC2.54□□□□□ -2
CPNE1Q99829 AC105272.1-201ENST00000438604 198 ntBASIC2.54□□□□□ -2
CPNE1Q99829 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.54□□□□□ -2
CPNE1Q99829 AC012308.1-201ENST00000451232 178 ntBASIC2.54□□□□□ -2
CPNE1Q99829 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.54□□□□□ -2
CPNE1Q99829 AC133134.1-201ENST00000466800 359 ntBASIC2.54□□□□□ -2
CPNE1Q99829 RPL22P13-201ENST00000493291 347 ntBASIC2.54□□□□□ -2
CPNE1Q99829 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.54□□□□□ -2
CPNE1Q99829 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.54□□□□□ -2
CPNE1Q99829 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.54□□□□□ -2
CPNE1Q99829 RNA5SP112-201ENST00000515937 99 ntBASIC2.54□□□□□ -2
CPNE1Q99829 RN7SKP40-201ENST00000517211 242 ntBASIC2.54□□□□□ -2
CPNE1Q99829 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.54□□□□□ -2
CPNE1Q99829 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.54□□□□□ -2
CPNE1Q99829 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.54□□□□□ -2
CPNE1Q99829 CR383656.8-201ENST00000549046 145 ntBASIC2.54□□□□□ -2
CPNE1Q99829 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.54□□□□□ -2
CPNE1Q99829 HMGB1P33-201ENST00000563485 527 ntBASIC2.54□□□□□ -2
CPNE1Q99829 AC090616.3-201ENST00000582184 217 ntBASIC2.54□□□□□ -2
CPNE1Q99829 MIR3117-201ENST00000584034 78 ntBASIC2.54□□□□□ -2
CPNE1Q99829 MIR92B-201ENST00000607575 96 ntBASIC2.54□□□□□ -2
CPNE1Q99829 AP003400.5-201ENST00000624827 617 ntBASIC2.54□□□□□ -2
CPNE1Q99829 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.54□□□□□ -2
CPNE1Q99829 AC080128.1-201ENST00000474389 1917 ntBASIC2.54□□□□□ -2
CPNE1Q99829 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
CPNE1Q99829 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
CPNE1Q99829 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CPNE1Q99829 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CPNE1Q99829 SNORD62.1-201ENST00000362541 86 ntBASIC2.53□□□□□ -2
CPNE1Q99829 RNU6-1303P-201ENST00000364841 107 ntBASIC2.53□□□□□ -2
CPNE1Q99829 AL162578.1-201ENST00000406202 378 ntBASIC2.53□□□□□ -2
CPNE1Q99829 RNU2-25P-201ENST00000411041 191 ntBASIC2.53□□□□□ -2
CPNE1Q99829 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.53□□□□□ -2
CPNE1Q99829 MTND1P34-201ENST00000438556 671 ntBASIC2.53□□□□□ -2
CPNE1Q99829 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.53□□□□□ -2
CPNE1Q99829 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.53□□□□□ -2
CPNE1Q99829 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.53□□□□□ -2
CPNE1Q99829 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.53□□□□□ -2
CPNE1Q99829 AC096725.1-201ENST00000514266 313 ntBASIC2.53□□□□□ -2
CPNE1Q99829 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms