Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM47Q96LD4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.15□□□□□ -1.58
TRIM47Q96LD4 SNORA71.3-201ENST00000362582 128 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 RNA5SP213-201ENST00000391031 106 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 RNU1-139P-201ENST00000391307 165 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 MIR921-201ENST00000401133 56 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 RPS26P47-201ENST00000427219 348 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 AP000907.1-201ENST00000428428 510 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 HMGB1P27-201ENST00000431429 603 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM47Q96LD4 RNU6-1218P-201ENST00000458990 108 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 AP000870.1-201ENST00000472927 406 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 AL121594.1-201ENST00000475906 575 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 RPL23AP45-201ENST00000476406 468 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 SUMO2P6-201ENST00000505273 288 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 RNU6-1114P-201ENST00000516022 107 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 RNU6-772P-201ENST00000516042 105 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 RNU6-65P-201ENST00000516332 98 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.15□□□□□ -1.59
TRIM47Q96LD4 TRAV37-201ENST00000553906 342 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 MIR3145-201ENST00000580727 82 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 RN7SL600P-201ENST00000581811 299 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 MIR8059-201ENST00000620427 81 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 CUL1P1-201ENST00000509510 2425 ntBASIC5.15□□□□□ -1.59
TRIM47Q96LD4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM47Q96LD4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM47Q96LD4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM47Q96LD4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
TRIM47Q96LD4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM47Q96LD4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
TRIM47Q96LD4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
TRIM47Q96LD4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
TRIM47Q96LD4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM47Q96LD4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
TRIM47Q96LD4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM47Q96LD4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM47Q96LD4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM47Q96LD4 MIR331-201ENST00000362302 94 ntBASIC5.14□□□□□ -1.59
TRIM47Q96LD4 RNU6-1180P-201ENST00000364935 107 ntBASIC5.14□□□□□ -1.59
TRIM47Q96LD4 RNU6-213P-201ENST00000384051 104 ntBASIC5.14□□□□□ -1.59
TRIM47Q96LD4 AL356095.1-201ENST00000417217 199 ntBASIC5.14□□□□□ -1.59
TRIM47Q96LD4 AL358472.1-201ENST00000431295 329 ntBASIC5.14□□□□□ -1.59
TRIM47Q96LD4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM47Q96LD4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC5.14□□□□□ -1.59
TRIM47Q96LD4 AC005042.3-201ENST00000453230 174 ntBASIC5.14□□□□□ -1.59
TRIM47Q96LD4 RPS15AP34-201ENST00000487776 387 ntBASIC5.14□□□□□ -1.59
TRIM47Q96LD4 RPS27AP13-201ENST00000498403 237 ntBASIC5.14□□□□□ -1.59
TRIM47Q96LD4 RN7SKP164-201ENST00000516138 266 ntBASIC5.14□□□□□ -1.59
TRIM47Q96LD4 AC103783.1-201ENST00000520506 373 ntBASIC5.14□□□□□ -1.59
TRIM47Q96LD4 AC005176.2-201ENST00000596933 147 ntBASIC5.14□□□□□ -1.59
TRIM47Q96LD4 AC069294.1-201ENST00000608397 350 ntBASIC5.14□□□□□ -1.59
TRIM47Q96LD4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM47Q96LD4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM47Q96LD4 AL451142.2-201ENST00000429076 2090 ntBASIC5.14□□□□□ -1.59
TRIM47Q96LD4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
TRIM47Q96LD4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM47Q96LD4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM47Q96LD4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TRIM47Q96LD4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.14□□□□□ -1.59
TRIM47Q96LD4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM47Q96LD4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 Y_RNA.35-201ENST00000362601 101 ntBASIC5.13□□□□□ -1.59
TRIM47Q96LD4 RNA5SP513-201ENST00000364648 118 ntBASIC5.13□□□□□ -1.59
TRIM47Q96LD4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 SNORD116-21-201ENST00000384507 92 ntBASIC5.13□□□□□ -1.59
TRIM47Q96LD4 Y_RNA.558-201ENST00000384685 113 ntBASIC5.13□□□□□ -1.59
TRIM47Q96LD4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 AC008739.3-201ENST00000603262 127 ntBASIC5.13□□□□□ -1.59
TRIM47Q96LD4 AL670379.3-201ENST00000605040 251 ntBASIC5.13□□□□□ -1.59
TRIM47Q96LD4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 AC116447.1-201ENST00000613153 453 ntBASIC5.13□□□□□ -1.59
TRIM47Q96LD4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 uc_338.13-201ENST00000618243 179 ntBASIC5.13□□□□□ -1.59
TRIM47Q96LD4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 AC140113.4-201ENST00000622087 222 ntBASIC5.13□□□□□ -1.59
TRIM47Q96LD4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 AF127577.6-201ENST00000623352 2191 ntBASIC5.13□□□□□ -1.59
TRIM47Q96LD4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 AC068647.1-201ENST00000489539 2265 ntBASIC5.13□□□□□ -1.59
TRIM47Q96LD4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM47Q96LD4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM47Q96LD4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM47Q96LD4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM47Q96LD4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms