Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 RNU6-927P-201ENST00000516199 100 ntBASIC2.51□□□□□ -2.01
ZNF440Q8IYI8 RNU6-566P-201ENST00000516790 107 ntBASIC2.51□□□□□ -2.01
ZNF440Q8IYI8 SNORA70.24-201ENST00000517233 118 ntBASIC2.51□□□□□ -2.01
ZNF440Q8IYI8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNF440Q8IYI8 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNF440Q8IYI8 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNF440Q8IYI8 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.51□□□□□ -2.01
ZNF440Q8IYI8 MIR5692C1-201ENST00000585309 91 ntBASIC2.51□□□□□ -2.01
ZNF440Q8IYI8 AC073539.2-201ENST00000597113 165 ntBASIC2.51□□□□□ -2.01
ZNF440Q8IYI8 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.51□□□□□ -2.01
ZNF440Q8IYI8 APOOP1-201ENST00000604695 592 ntBASIC2.51□□□□□ -2.01
ZNF440Q8IYI8 AL022345.1-201ENST00000607292 135 ntBASIC2.51□□□□□ -2.01
ZNF440Q8IYI8 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.51□□□□□ -2.01
ZNF440Q8IYI8 AC034102.8-201ENST00000615146 484 ntBASIC2.51□□□□□ -2.01
ZNF440Q8IYI8 MTND1P37-201ENST00000636562 264 ntBASIC2.51□□□□□ -2.01
ZNF440Q8IYI8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ZNF440Q8IYI8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 DEFB108F-201ENST00000344638 222 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 Y_RNA.212-201ENST00000364177 102 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 Y_RNA.259-201ENST00000364619 101 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 Y_RNA.384-201ENST00000383909 102 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 Y_RNA.387-201ENST00000383918 102 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 Y_RNA.399-201ENST00000383955 105 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 RNU6-434P-201ENST00000384376 107 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 RNU6-45P-201ENST00000384471 107 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 MIR592-201ENST00000384959 97 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 AL138827.1-201ENST00000402666 306 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 SNORA11-201ENST00000408789 128 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 RNA5SP21-201ENST00000410917 96 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 VN1R36P-201ENST00000414936 291 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 RPL21P90-201ENST00000415692 466 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 AF228730.4-201ENST00000421457 183 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 HMGB1P27-201ENST00000431429 603 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 AC087499.2-201ENST00000432861 149 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 RPS24P13-201ENST00000442520 397 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 RPS3AP12-201ENST00000443616 753 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 AC104472.2-201ENST00000469035 601 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 RPL31P60-201ENST00000478450 367 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 RN7SL499P-201ENST00000481141 276 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 AC103975.1-201ENST00000482506 483 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 RN7SL297P-201ENST00000483161 293 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 SNORA14.1-201ENST00000516113 141 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 RNU6-559P-201ENST00000516151 98 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 RNU6-1256P-201ENST00000516539 103 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 RNU6-1069P-201ENST00000516612 133 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 RNA5SP454-201ENST00000517231 127 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 COPS8P3-201ENST00000526024 482 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 AP005639.2-201ENST00000527592 928 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 MTCO3P23-201ENST00000561363 289 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 MTCO3P13-201ENST00000577757 781 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 MIR4790-201ENST00000577799 79 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 AC098826.3-201ENST00000603823 466 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 U2.17-201ENST00000611454 95 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 AC090132.2-201ENST00000615881 347 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 Z99571.1-201ENST00000636677 394 ntBASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.5□□□□□ -2.01
ZNF440Q8IYI8 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 SNORD116-11-201ENST00000383882 92 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 SNORD21-201ENST00000383953 95 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 RNU6-1013P-201ENST00000384180 107 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 SNORA44-201ENST00000384584 132 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 Y_RNA.579-201ENST00000390939 94 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 RPLP0P7-201ENST00000416050 667 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 RPL7P10-201ENST00000417407 739 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 NCOR1P3-201ENST00000420479 303 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 MTCO2P12-201ENST00000427426 682 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 AL591704.1-201ENST00000432574 275 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 RPL32P28-201ENST00000443577 397 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 AL360271.2-201ENST00000447710 161 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 TRBV1-201ENST00000476502 284 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 MTND5P5-201ENST00000503764 376 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 MTND3P25-201ENST00000509243 135 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 RN7SKP24-201ENST00000515888 284 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 SNORA31.8-201ENST00000516327 108 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 SNORA70.16-201ENST00000516390 95 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 SNORA74D-201ENST00000516404 141 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 RNA5SP468-201ENST00000516782 93 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 SNORA25.17-201ENST00000517184 124 ntBASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.49□□□□□ -2.01
ZNF440Q8IYI8 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms