Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LYSMD3Q7Z3D4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 MTND5P35-201ENST00000557537 1720 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 AC018529.3-201ENST00000624212 2254 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 RNU1-83P-201ENST00000363426 164 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 RNU6-103P-201ENST00000363686 107 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 snoU2_19.4-201ENST00000364329 80 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 RNA5SP505-201ENST00000364748 108 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 RNU1-140P-201ENST00000365040 165 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 RNU6-629P-201ENST00000384061 103 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 RPL27AP8-201ENST00000424277 446 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 AC112220.1-201ENST00000434628 355 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 GPM6BP3-201ENST00000442797 145 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 AC009963.2-201ENST00000453431 138 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 RN7SL817P-201ENST00000480777 288 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 RN7SL459P-201ENST00000481078 302 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 RNA5SP291-201ENST00000517222 105 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 RN7SL690P-201ENST00000582087 240 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 AC008745.1-201ENST00000604064 271 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 MIR6129-201ENST00000616087 109 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 MFSD8-216ENST00000641147 4009 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.66□□□□□ -1.66
LYSMD3Q7Z3D4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LYSMD3Q7Z3D4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.65□□□□□ -1.66
LYSMD3Q7Z3D4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LYSMD3Q7Z3D4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
LYSMD3Q7Z3D4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LYSMD3Q7Z3D4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LYSMD3Q7Z3D4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.65□□□□□ -1.66
LYSMD3Q7Z3D4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 RNA5SP267-201ENST00000364893 126 ntBASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 Y_RNA.337-201ENST00000365312 102 ntBASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 RNA5SP235-201ENST00000365411 114 ntBASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 Z98749.2-208ENST00000381646 500 ntBASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 SNORA36A-201ENST00000384221 132 ntBASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 U3.22-201ENST00000391120 215 ntBASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 RNU2-54P-201ENST00000410299 190 ntBASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 snoU13.6-201ENST00000458785 104 ntBASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 SNRPGP7-201ENST00000469016 106 ntBASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 RN7SL354P-201ENST00000469282 294 ntBASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 RPL21P126-201ENST00000470049 478 ntBASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 CYCSP23-201ENST00000519781 313 ntBASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 AC090877.1-201ENST00000561418 344 ntBASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 AC015912.2-201ENST00000571053 181 ntBASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 MIR4284-201ENST00000578924 81 ntBASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 AC005086.4-201ENST00000623065 213 ntBASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 U3.53-201ENST00000628922 216 ntBASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.65□□□□□ -1.67
LYSMD3Q7Z3D4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 AL450326.2-201ENST00000421913 1962 ntBASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 RNU6-270P-201ENST00000364131 105 ntBASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 SNORA62-201ENST00000365493 153 ntBASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 SNORA68.2-201ENST00000391263 128 ntBASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 SNRPEP9-201ENST00000436794 238 ntBASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 RPS26P2-201ENST00000440331 348 ntBASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 AC011276.1-201ENST00000469688 323 ntBASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 RPL30P12-201ENST00000474666 353 ntBASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 RAC1P5-201ENST00000512182 576 ntBASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 RNA5SP54-201ENST00000516951 92 ntBASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 RNU4-60P-201ENST00000517239 135 ntBASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 HSPE1P4-201ENST00000550617 308 ntBASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 MED28P6-201ENST00000558776 231 ntBASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 MIR7703-201ENST00000620784 77 ntBASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
LYSMD3Q7Z3D4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms