Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 SERF1AP1-201ENST00000514575 187 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 RNU6-789P-201ENST00000517105 102 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 MIR4643-201ENST00000577473 78 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 AL023881.1-201ENST00000621088 301 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
RNF111Q6ZNA4 Z82217.1-201ENST00000625157 8149 ntBASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 AC126755.2-208ENST00000327792 462 ntBASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 AC138969.1-213ENST00000331436 462 ntBASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 MIR423-201ENST00000362201 94 ntBASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 RNU6-886P-201ENST00000384319 105 ntBASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 U3.37-201ENST00000408528 213 ntBASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 RNA5SP31-201ENST00000411144 127 ntBASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 TPT1P12-201ENST00000448968 492 ntBASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 MED28P2-201ENST00000475771 317 ntBASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 RPL23AP75-201ENST00000491601 451 ntBASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 AC091167.1-201ENST00000492017 396 ntBASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 RNU6-496P-201ENST00000516145 99 ntBASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 SNORA43.2-201ENST00000516652 128 ntBASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 CYCSP39-201ENST00000565821 309 ntBASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 MIR3138-201ENST00000585238 82 ntBASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 AC007390.2-201ENST00000606229 3803 ntBASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 MIR3653-201ENST00000625572 110 ntBASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 SCARNA4-201ENST00000629045 128 ntBASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
RNF111Q6ZNA4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 Y_RNA.83-201ENST00000363005 113 ntBASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 RNU6-843P-201ENST00000384454 104 ntBASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 RNU6-140P-201ENST00000384566 108 ntBASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 SNORA19-201ENST00000384737 128 ntBASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 MIR32-201ENST00000384965 70 ntBASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 RNA5SP44-201ENST00000410446 133 ntBASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 Y_RNA.793-201ENST00000411222 111 ntBASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 HMGN2P21-201ENST00000447764 270 ntBASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 AL136097.1-201ENST00000456945 913 ntBASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 AC105137.1-201ENST00000484355 562 ntBASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 MIR3939-201ENST00000582614 106 ntBASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 U2.14-201ENST00000615943 113 ntBASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF111Q6ZNA4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 RNU6-879P-201ENST00000364328 108 ntBASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 Z98749.2-208ENST00000381646 500 ntBASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 RNU6-658P-201ENST00000384606 106 ntBASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 AL445305.1-201ENST00000432577 575 ntBASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 AC007389.2-201ENST00000434630 306 ntBASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 NUTF2P3-201ENST00000448540 384 ntBASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 Y_RNA.644-201ENST00000459006 113 ntBASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 RPL30P1-201ENST00000488676 339 ntBASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 Y_RNA.674-201ENST00000516362 113 ntBASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 RNU6-1183P-201ENST00000517054 60 ntBASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 AC020895.1-201ENST00000595362 272 ntBASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 RPL23AP88-201ENST00000605759 454 ntBASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 MIR6810-201ENST00000622701 70 ntBASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 MIR6830-201ENST00000636015 70 ntBASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.93□□□□□ -1.78
RNF111Q6ZNA4 HAUS6P2-201ENST00000433254 2404 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms