Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RNU4-73P-201ENST00000363164 141 ntBASIC4.06□□□□□ -1.76
CCDC144BQ3MJ40 Y_RNA.482-201ENST00000384377 111 ntBASIC4.06□□□□□ -1.76
CCDC144BQ3MJ40 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC144BQ3MJ40 RPS29P13-201ENST00000402041 169 ntBASIC4.06□□□□□ -1.76
CCDC144BQ3MJ40 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
CCDC144BQ3MJ40 RNU6-1245P-201ENST00000411130 106 ntBASIC4.06□□□□□ -1.76
CCDC144BQ3MJ40 AL030996.1-201ENST00000411430 235 ntBASIC4.06□□□□□ -1.76
CCDC144BQ3MJ40 AC005326.1-201ENST00000429197 123 ntBASIC4.06□□□□□ -1.76
CCDC144BQ3MJ40 AC115115.1-201ENST00000449927 248 ntBASIC4.06□□□□□ -1.76
CCDC144BQ3MJ40 AC133134.1-201ENST00000466800 359 ntBASIC4.06□□□□□ -1.76
CCDC144BQ3MJ40 MED28P2-201ENST00000475771 317 ntBASIC4.06□□□□□ -1.76
CCDC144BQ3MJ40 IMMP1LP2-201ENST00000552954 492 ntBASIC4.06□□□□□ -1.76
CCDC144BQ3MJ40 AC005476.1-201ENST00000554427 397 ntBASIC4.06□□□□□ -1.76
CCDC144BQ3MJ40 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC144BQ3MJ40 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC144BQ3MJ40 AC112487.2-201ENST00000637950 304 ntBASIC4.06□□□□□ -1.76
CCDC144BQ3MJ40 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 Y_RNA.61-201ENST00000362835 102 ntBASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 Y_RNA.474-201ENST00000384341 102 ntBASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 SNORD116-20-201ENST00000384529 92 ntBASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 AL590632.1-201ENST00000424289 371 ntBASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 PCMTD1P1-201ENST00000455560 355 ntBASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 RN7SL330P-201ENST00000469709 307 ntBASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 RPS27P26-201ENST00000494583 239 ntBASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 AC093663.1-201ENST00000497190 394 ntBASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 RNU2-27P-201ENST00000516185 142 ntBASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC144BQ3MJ40 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 RNU6-105P-201ENST00000363909 104 ntBASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 RNU6-487P-201ENST00000365430 104 ntBASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 CD24P4-201ENST00000382840 243 ntBASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 RN7SL807P-201ENST00000470923 297 ntBASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 AC116337.1-201ENST00000509680 687 ntBASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 RNU6-277P-201ENST00000516272 106 ntBASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 Y_RNA.675-201ENST00000516389 149 ntBASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 TRAV32-201ENST00000553993 340 ntBASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 AC103996.1-201ENST00000555468 102 ntBASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 BNIP3P16-201ENST00000589779 534 ntBASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 AL391813.1-201ENST00000603098 260 ntBASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 AC009314.1-201ENST00000603871 304 ntBASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 AC018889.1-201ENST00000605372 397 ntBASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 AC124303.1-201ENST00000605703 360 ntBASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 RNU6-91P-201ENST00000607774 107 ntBASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 AC005046.1-201ENST00000608515 625 ntBASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 AC019193.3-201ENST00000609144 554 ntBASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 AC107294.3-201ENST00000609211 526 ntBASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 MIR6128-201ENST00000615528 109 ntBASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
CCDC144BQ3MJ40 MTND4P23-201ENST00000447723 1363 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 AC058791.1-201ENST00000608412 3198 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 RPL9P7-201ENST00000330965 580 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 Y_RNA.11-201ENST00000362375 109 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 RNU6-843P-201ENST00000384454 104 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 MIR147B-201ENST00000390185 80 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 SNORA48.2-201ENST00000390926 124 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 SNORD17-201ENST00000390930 237 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 AC074117.2-201ENST00000417130 397 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 AL358075.3-201ENST00000426289 226 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 AC006989.1-201ENST00000427212 131 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 BX679664.1-201ENST00000434429 253 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 AL513043.1-201ENST00000439124 535 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 AC010401.1-201ENST00000463867 348 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 RPL9P9-202ENST00000466501 579 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 RPS29P2-201ENST00000479278 136 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 AC018437.1-201ENST00000492214 406 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 AC010265.1-201ENST00000513509 211 ntBASIC4.03□□□□□ -1.76
CCDC144BQ3MJ40 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms