Protein–RNA interactions for Protein: Q15223

NECTIN1, Nectin-1, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1Q15223 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.61□□□□□ -1.99
NECTIN1Q15223 MTND3P16-201ENST00000452205 344 ntBASIC2.61□□□□□ -1.99
NECTIN1Q15223 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.61□□□□□ -1.99
NECTIN1Q15223 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.61□□□□□ -1.99
NECTIN1Q15223 RPS20P22-201ENST00000473700 357 ntBASIC2.61□□□□□ -1.99
NECTIN1Q15223 RPL39P36-201ENST00000490784 156 ntBASIC2.61□□□□□ -1.99
NECTIN1Q15223 RPL38P4-201ENST00000502376 214 ntBASIC2.61□□□□□ -1.99
NECTIN1Q15223 AC009901.1-201ENST00000506703 541 ntBASIC2.61□□□□□ -1.99
NECTIN1Q15223 SNORA20.3-201ENST00000516880 132 ntBASIC2.61□□□□□ -1.99
NECTIN1Q15223 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.61□□□□□ -1.99
NECTIN1Q15223 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.61□□□□□ -1.99
NECTIN1Q15223 SNRPGP18-201ENST00000553000 214 ntBASIC2.61□□□□□ -1.99
NECTIN1Q15223 MIR5583-1-201ENST00000580941 59 ntBASIC2.61□□□□□ -1.99
NECTIN1Q15223 MIR3609-201ENST00000582661 80 ntBASIC2.61□□□□□ -1.99
NECTIN1Q15223 HSPE1P7-201ENST00000604681 321 ntBASIC2.61□□□□□ -1.99
NECTIN1Q15223 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.61□□□□□ -1.99
NECTIN1Q15223 SCARNA15.3-201ENST00000626315 122 ntBASIC2.61□□□□□ -1.99
NECTIN1Q15223 SCARNA4.1-201ENST00000628597 123 ntBASIC2.61□□□□□ -1.99
NECTIN1Q15223 HSPA8P4-201ENST00000511877 1920 ntBASIC2.61□□□□□ -1.99
NECTIN1Q15223 AC007785.2-201ENST00000598627 1916 ntBASIC2.61□□□□□ -1.99
NECTIN1Q15223 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.61□□□□□ -1.99
NECTIN1Q15223 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NECTIN1Q15223 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NECTIN1Q15223 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
NECTIN1Q15223 UBE2L2-201ENST00000254302 429 ntBASIC2.6□□□□□ -1.99
NECTIN1Q15223 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NECTIN1Q15223 SNORA48.3-201ENST00000391081 134 ntBASIC2.6□□□□□ -1.99
NECTIN1Q15223 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.6□□□□□ -1.99
NECTIN1Q15223 HMGN2P35-201ENST00000412164 270 ntBASIC2.6□□□□□ -1.99
NECTIN1Q15223 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.6□□□□□ -1.99
NECTIN1Q15223 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.6□□□□□ -1.99
NECTIN1Q15223 CALM2P2-201ENST00000428512 440 ntBASIC2.6□□□□□ -1.99
NECTIN1Q15223 AL591212.2-201ENST00000433923 257 ntBASIC2.6□□□□□ -1.99
NECTIN1Q15223 MTND4P25-201ENST00000441039 533 ntBASIC2.6□□□□□ -1.99
NECTIN1Q15223 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.6□□□□□ -1.99
NECTIN1Q15223 FABP5P13-201ENST00000452144 328 ntBASIC2.6□□□□□ -1.99
NECTIN1Q15223 CCDC34P1-201ENST00000507441 517 ntBASIC2.6□□□□□ -1.99
NECTIN1Q15223 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.6□□□□□ -1.99
NECTIN1Q15223 RNU6-677P-201ENST00000516914 101 ntBASIC2.6□□□□□ -1.99
NECTIN1Q15223 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.6□□□□□ -1.99
NECTIN1Q15223 ATP5F1P5-201ENST00000526403 760 ntBASIC2.6□□□□□ -1.99
NECTIN1Q15223 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.6□□□□□ -1.99
NECTIN1Q15223 ADI1P3-201ENST00000549509 470 ntBASIC2.6□□□□□ -1.99
NECTIN1Q15223 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.6□□□□□ -1.99
NECTIN1Q15223 AC098826.3-201ENST00000603823 466 ntBASIC2.6□□□□□ -1.99
NECTIN1Q15223 AL161798.1-201ENST00000604630 131 ntBASIC2.6□□□□□ -1.99
NECTIN1Q15223 MIR15A-201ENST00000607334 83 ntBASIC2.6□□□□□ -1.99
NECTIN1Q15223 AC006504.8-201ENST00000621046 635 ntBASIC2.6□□□□□ -1.99
NECTIN1Q15223 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.6□□□□□ -1.99
NECTIN1Q15223 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.6□□□□□ -1.99
NECTIN1Q15223 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.6□□□□□ -1.99
NECTIN1Q15223 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NECTIN1Q15223 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NECTIN1Q15223 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NECTIN1Q15223 AC022336.2-201ENST00000568966 2538 ntBASIC2.6□□□□□ -1.99
NECTIN1Q15223 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.59□□□□□ -1.99
NECTIN1Q15223 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.59□□□□□ -1.99
NECTIN1Q15223 NACAP2-201ENST00000318548 624 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 MIR449A-201ENST00000362113 91 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 RNU6-1287P-201ENST00000362914 107 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 VTRNA1-1-201ENST00000363120 99 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 RNU6-1167P-201ENST00000363227 94 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 RNU6-512P-201ENST00000364438 103 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 SNORA4.3-201ENST00000365564 137 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 RNU6-741P-201ENST00000383889 107 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 RNU6-190P-201ENST00000384154 102 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 RNU6-1060P-201ENST00000384664 107 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 MIR634-201ENST00000385208 97 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 RNU6-332P-201ENST00000391193 108 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 CISD1P1-201ENST00000393907 327 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 RNU2-33P-201ENST00000410344 192 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 HSPE1P1-201ENST00000421494 318 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.59□□□□□ -1.99
NECTIN1Q15223 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.59□□□□□ -1.99
NECTIN1Q15223 RNU6-953P-201ENST00000459154 107 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 MTCO2P30-201ENST00000503662 364 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 SUMO2P6-201ENST00000505273 288 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 AC018710.1-201ENST00000506509 158 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.59□□□□□ -1.99
NECTIN1Q15223 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.59□□□□□ -1.99
NECTIN1Q15223 SNORA31.11-201ENST00000516528 139 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 SCARNA16.3-201ENST00000516595 184 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 RNU6-914P-201ENST00000516749 109 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 SNORD59.2-201ENST00000516873 68 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 RNU6-711P-201ENST00000517255 106 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.59□□□□□ -1.99
NECTIN1Q15223 AL121579.1-201ENST00000555129 305 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 AL118558.2-201ENST00000556294 238 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 AMZ2P1-203ENST00000565833 850 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 AC002545.1-201ENST00000592511 181 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 AL158032.1-201ENST00000605401 106 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 RNU6-89P-201ENST00000606519 100 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
NECTIN1Q15223 AL359547.2-201ENST00000615810 418 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 AC092794.2-201ENST00000620933 563 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 AL049641.1-201ENST00000441055 1948 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 OR4G1P-203ENST00000641984 1631 ntBASIC2.59□□□□□ -1.99
NECTIN1Q15223 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.59□□□□□ -2
NECTIN1Q15223 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
NECTIN1Q15223 Y_RNA.111-201ENST00000363248 100 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms