Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
EFEMP1Q12805 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
EFEMP1Q12805 AC006504.1-201ENST00000562493 3666 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
EFEMP1Q12805 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
EFEMP1Q12805 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
EFEMP1Q12805 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
EFEMP1Q12805 SNORD9-201ENST00000362566 104 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 RNU6-923P-201ENST00000364753 107 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 U3.13-201ENST00000364804 214 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 RNU6-1130P-201ENST00000365434 107 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 Y_RNA.353-201ENST00000365440 108 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 SNORD116-18-201ENST00000383961 92 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 RNU6-658P-201ENST00000384606 106 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 MIR449B-201ENST00000384995 97 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
EFEMP1Q12805 RNU6-754P-201ENST00000391166 107 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 SNORA68.2-201ENST00000391263 128 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
EFEMP1Q12805 AL079342.1-201ENST00000401460 267 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 AL033519.2-201ENST00000403958 392 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 HSPE1P8-201ENST00000406997 288 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 RNU6-651P-201ENST00000411040 105 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.79□□□□□ -1.8
EFEMP1Q12805 RPL21P90-201ENST00000415692 466 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
EFEMP1Q12805 AC092573.2-201ENST00000434546 243 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 RPS20P1-201ENST00000434853 354 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 RNU6-1219P-201ENST00000516143 112 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 RNU6-677P-201ENST00000516914 101 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.79□□□□□ -1.8
EFEMP1Q12805 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.79□□□□□ -1.8
EFEMP1Q12805 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.79□□□□□ -1.8
EFEMP1Q12805 AL162424.1-201ENST00000602325 221 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.79□□□□□ -1.8
EFEMP1Q12805 AC097372.5-201ENST00000623665 376 ntBASIC3.79□□□□□ -1.8
EFEMP1Q12805 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.79□□□□□ -1.8
EFEMP1Q12805 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
EFEMP1Q12805 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
EFEMP1Q12805 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
EFEMP1Q12805 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
EFEMP1Q12805 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.78□□□□□ -1.8
EFEMP1Q12805 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
EFEMP1Q12805 AC018555.1-201ENST00000567548 1980 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
EFEMP1Q12805 AC007785.2-201ENST00000598627 1916 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 SAGE4P-201ENST00000442271 3381 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
EFEMP1Q12805 MIR23A-201ENST00000385245 73 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 RPL21P75-201ENST00000396599 483 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.78□□□□□ -1.8
EFEMP1Q12805 RPL21P28-201ENST00000401418 483 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.78□□□□□ -1.8
EFEMP1Q12805 AL590556.1-201ENST00000423231 483 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 BX679664.1-201ENST00000434429 253 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 PIGFP3-201ENST00000441918 722 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.78□□□□□ -1.8
EFEMP1Q12805 AL358232.1-201ENST00000448030 501 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 SSXP4-201ENST00000451349 245 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 HSPE1P25-201ENST00000455484 251 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 RPL21P41-201ENST00000459863 264 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 RPL21P39-201ENST00000463605 483 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 AC132942.1-201ENST00000486753 483 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 AC093591.1-201ENST00000491435 481 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 RPL21P16-201ENST00000495531 483 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.78□□□□□ -1.8
EFEMP1Q12805 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.78□□□□□ -1.8
EFEMP1Q12805 MTND3P25-201ENST00000509243 135 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 AC091144.1-201ENST00000519573 138 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.78□□□□□ -1.8
EFEMP1Q12805 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.78□□□□□ -1.8
EFEMP1Q12805 MIR3922-201ENST00000585192 84 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 AC008739.3-201ENST00000603262 127 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 AC098826.3-201ENST00000603823 466 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 Y_RNA.772-201ENST00000606692 102 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 AC108706.1-201ENST00000611053 297 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 TUG1_2.1-201ENST00000614234 87 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 MIR6075-201ENST00000620782 95 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 AL031601.2-202ENST00000622650 282 ntBASIC3.78□□□□□ -1.8
EFEMP1Q12805 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.78□□□□□ -1.8
EFEMP1Q12805 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
EFEMP1Q12805 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
EFEMP1Q12805 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
EFEMP1Q12805 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
EFEMP1Q12805 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.77□□□□□ -1.81
EFEMP1Q12805 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.77□□□□□ -1.81
EFEMP1Q12805 MTND5P9-201ENST00000503854 1755 ntBASIC3.77□□□□□ -1.81
EFEMP1Q12805 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
EFEMP1Q12805 Y_RNA.358-201ENST00000365491 99 ntBASIC3.77□□□□□ -1.81
EFEMP1Q12805 RNU4-65P-201ENST00000410473 140 ntBASIC3.77□□□□□ -1.81
EFEMP1Q12805 RNA5SP39-201ENST00000411245 120 ntBASIC3.77□□□□□ -1.81
EFEMP1Q12805 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.77□□□□□ -1.81
EFEMP1Q12805 RPS15AP40-201ENST00000419621 391 ntBASIC3.77□□□□□ -1.81
EFEMP1Q12805 AL162389.1-201ENST00000449233 177 ntBASIC3.77□□□□□ -1.81
EFEMP1Q12805 AL451050.1-201ENST00000450126 415 ntBASIC3.77□□□□□ -1.81
EFEMP1Q12805 RPL37P6-201ENST00000460682 294 ntBASIC3.77□□□□□ -1.81
EFEMP1Q12805 AP001324.2-201ENST00000461163 319 ntBASIC3.77□□□□□ -1.81
EFEMP1Q12805 AC133134.1-201ENST00000466800 359 ntBASIC3.77□□□□□ -1.81
EFEMP1Q12805 RPL30P10-201ENST00000488148 337 ntBASIC3.77□□□□□ -1.81
EFEMP1Q12805 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 567.5 ms