Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RNU7-59P-201ENST00000459101 61 ntBASIC0.98□□□□□ -2.25
NUP98P52948 RPL37P6-201ENST00000460682 294 ntBASIC0.98□□□□□ -2.25
NUP98P52948 RPL7P43-201ENST00000478876 753 ntBASIC0.98□□□□□ -2.25
NUP98P52948 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.98□□□□□ -2.25
NUP98P52948 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.98□□□□□ -2.25
NUP98P52948 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.98□□□□□ -2.25
NUP98P52948 AP000676.3-201ENST00000623299 569 ntBASIC0.98□□□□□ -2.25
NUP98P52948 AC017037.3-201ENST00000625016 472 ntBASIC0.98□□□□□ -2.25
NUP98P52948 AC107982.1-201ENST00000507171 1300 ntBASIC0.97□□□□□ -2.25
NUP98P52948 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
NUP98P52948 ZNF680P1-201ENST00000436625 1469 ntBASIC0.97□□□□□ -2.25
NUP98P52948 DDX43P2-201ENST00000604753 1354 ntBASIC0.97□□□□□ -2.25
NUP98P52948 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.97□□□□□ -2.25
NUP98P52948 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.97□□□□□ -2.25
NUP98P52948 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.97□□□□□ -2.25
NUP98P52948 RNU6-952P-201ENST00000391164 108 ntBASIC0.97□□□□□ -2.25
NUP98P52948 UBE2FP1-201ENST00000416536 447 ntBASIC0.97□□□□□ -2.25
NUP98P52948 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.97□□□□□ -2.25
NUP98P52948 ISCA1P1-201ENST00000426679 387 ntBASIC0.97□□□□□ -2.25
NUP98P52948 MTND2P20-201ENST00000440805 661 ntBASIC0.97□□□□□ -2.25
NUP98P52948 BRK1P2-201ENST00000442875 223 ntBASIC0.97□□□□□ -2.25
NUP98P52948 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.97□□□□□ -2.25
NUP98P52948 MTND5P13-201ENST00000513046 1079 ntBASIC0.97□□□□□ -2.25
NUP98P52948 RNU6-1102P-201ENST00000516149 96 ntBASIC0.97□□□□□ -2.25
NUP98P52948 RN7SL793P-201ENST00000583259 296 ntBASIC0.97□□□□□ -2.25
NUP98P52948 AL353997.4-201ENST00000586196 166 ntBASIC0.97□□□□□ -2.25
NUP98P52948 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.97□□□□□ -2.25
NUP98P52948 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.97□□□□□ -2.25
NUP98P52948 Y_RNA.30-201ENST00000362572 97 ntBASIC0.96□□□□□ -2.26
NUP98P52948 RNU6-529P-201ENST00000363383 104 ntBASIC0.96□□□□□ -2.26
NUP98P52948 RNU6-17P-201ENST00000384245 107 ntBASIC0.96□□□□□ -2.26
NUP98P52948 RNU6-18P-201ENST00000384527 107 ntBASIC0.96□□□□□ -2.26
NUP98P52948 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
NUP98P52948 RNU2-48P-201ENST00000410694 191 ntBASIC0.96□□□□□ -2.26
NUP98P52948 BX664727.1-201ENST00000416024 466 ntBASIC0.96□□□□□ -2.26
NUP98P52948 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.96□□□□□ -2.26
NUP98P52948 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
NUP98P52948 RPL36AP53-201ENST00000432891 316 ntBASIC0.96□□□□□ -2.26
NUP98P52948 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.96□□□□□ -2.26
NUP98P52948 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
NUP98P52948 ARPC3P5-201ENST00000448802 534 ntBASIC0.96□□□□□ -2.26
NUP98P52948 AP001025.1-201ENST00000486139 332 ntBASIC0.96□□□□□ -2.26
NUP98P52948 AC018868.1-201ENST00000491307 315 ntBASIC0.96□□□□□ -2.26
NUP98P52948 AC109927.2-201ENST00000506416 303 ntBASIC0.96□□□□□ -2.26
NUP98P52948 AC093809.1-201ENST00000509155 340 ntBASIC0.96□□□□□ -2.26
NUP98P52948 AC121161.1-201ENST00000510606 652 ntBASIC0.96□□□□□ -2.26
NUP98P52948 RNU6-927P-201ENST00000516199 100 ntBASIC0.96□□□□□ -2.26
NUP98P52948 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.96□□□□□ -2.26
NUP98P52948 CYCSP27-201ENST00000527643 293 ntBASIC0.96□□□□□ -2.26
NUP98P52948 IMMP1LP2-201ENST00000552954 492 ntBASIC0.96□□□□□ -2.26
NUP98P52948 HIGD1AP17-201ENST00000554576 276 ntBASIC0.96□□□□□ -2.26
NUP98P52948 AC112191.3-201ENST00000604371 277 ntBASIC0.96□□□□□ -2.26
NUP98P52948 AC096772.1-201ENST00000609146 564 ntBASIC0.96□□□□□ -2.26
NUP98P52948 AL133445.2-201ENST00000611191 527 ntBASIC0.96□□□□□ -2.26
NUP98P52948 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.96□□□□□ -2.26
NUP98P52948 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
NUP98P52948 AP000776.1-201ENST00000530032 1663 ntBASIC0.96□□□□□ -2.26
NUP98P52948 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.96□□□□□ -2.26
NUP98P52948 RNU6-1122P-201ENST00000384449 107 ntBASIC0.96□□□□□ -2.26
NUP98P52948 GTF2IP3-201ENST00000433887 494 ntBASIC0.96□□□□□ -2.26
NUP98P52948 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.96□□□□□ -2.26
NUP98P52948 AC005908.1-201ENST00000468701 347 ntBASIC0.96□□□□□ -2.26
NUP98P52948 AC034114.1-201ENST00000520293 285 ntBASIC0.96□□□□□ -2.26
NUP98P52948 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.96□□□□□ -2.26
NUP98P52948 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.96□□□□□ -2.26
NUP98P52948 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.96□□□□□ -2.26
NUP98P52948 AC079598.5-201ENST00000547460 117 ntBASIC0.96□□□□□ -2.26
NUP98P52948 MIR3912-201ENST00000577566 105 ntBASIC0.96□□□□□ -2.26
NUP98P52948 AL078604.3-201ENST00000615580 211 ntBASIC0.96□□□□□ -2.26
NUP98P52948 ICE2P2-201ENST00000483823 2787 ntBASIC0.95□□□□□ -2.26
NUP98P52948 SNORA25.8-201ENST00000364831 128 ntBASIC0.95□□□□□ -2.26
NUP98P52948 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
NUP98P52948 DHFRP6-201ENST00000401776 268 ntBASIC0.95□□□□□ -2.26
NUP98P52948 MIR1262-201ENST00000408276 93 ntBASIC0.95□□□□□ -2.26
NUP98P52948 AC027644.1-201ENST00000419595 298 ntBASIC0.95□□□□□ -2.26
NUP98P52948 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.95□□□□□ -2.26
NUP98P52948 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.95□□□□□ -2.26
NUP98P52948 AC244035.1-201ENST00000430042 390 ntBASIC0.95□□□□□ -2.26
NUP98P52948 SEPT7P5-201ENST00000434048 306 ntBASIC0.95□□□□□ -2.26
NUP98P52948 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.95□□□□□ -2.26
NUP98P52948 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.95□□□□□ -2.26
NUP98P52948 ELOCP30-201ENST00000447108 299 ntBASIC0.95□□□□□ -2.26
NUP98P52948 AC244505.3-201ENST00000454598 187 ntBASIC0.95□□□□□ -2.26
NUP98P52948 AC008379.1-201ENST00000463655 464 ntBASIC0.95□□□□□ -2.26
NUP98P52948 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.95□□□□□ -2.26
NUP98P52948 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.95□□□□□ -2.26
NUP98P52948 AC138627.2-201ENST00000624202 601 ntBASIC0.95□□□□□ -2.26
NUP98P52948 RBBP8P1-201ENST00000449447 1844 ntBASIC0.95□□□□□ -2.26
NUP98P52948 CBX3P1-201ENST00000325243 554 ntBASIC0.94□□□□□ -2.26
NUP98P52948 RNU6-97P-201ENST00000363387 104 ntBASIC0.94□□□□□ -2.26
NUP98P52948 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.94□□□□□ -2.26
NUP98P52948 AL022400.1-201ENST00000423946 935 ntBASIC0.94□□□□□ -2.26
NUP98P52948 AC079448.1-201ENST00000449377 373 ntBASIC0.94□□□□□ -2.26
NUP98P52948 MEMO1P3-201ENST00000459811 302 ntBASIC0.94□□□□□ -2.26
NUP98P52948 RPF2P2-201ENST00000504693 896 ntBASIC0.94□□□□□ -2.26
NUP98P52948 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.94□□□□□ -2.26
NUP98P52948 SNORA48.9-201ENST00000516419 162 ntBASIC0.94□□□□□ -2.26
NUP98P52948 AC005832.3-201ENST00000537929 631 ntBASIC0.94□□□□□ -2.26
NUP98P52948 TRAV32-201ENST00000553993 340 ntBASIC0.94□□□□□ -2.26
NUP98P52948 SNORD115-3-201ENST00000363100 82 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms