Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.44□□□□□ -2.18
COL18A1P39060 FABP5P15-201ENST00000453566 214 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.44□□□□□ -2.18
COL18A1P39060 AC087854.1-201ENST00000519706 414 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 DEFB108A-201ENST00000530110 222 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 AC006199.1-201ENST00000548728 219 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 AC105245.1-201ENST00000581934 244 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 AC024581.2-201ENST00000619986 252 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 SDR42E1P4-201ENST00000620894 481 ntBASIC1.44□□□□□ -2.18
COL18A1P39060 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.44□□□□□ -2.18
COL18A1P39060 AC008555.8-201ENST00000623602 2168 ntBASIC1.43□□□□□ -2.18
COL18A1P39060 RNU6-512P-201ENST00000364438 103 ntBASIC1.43□□□□□ -2.18
COL18A1P39060 ZNF90P2-204ENST00000419323 1075 ntBASIC1.43□□□□□ -2.18
COL18A1P39060 RPL30P4-201ENST00000429309 333 ntBASIC1.43□□□□□ -2.18
COL18A1P39060 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.43□□□□□ -2.18
COL18A1P39060 RPS25P9-201ENST00000435591 252 ntBASIC1.43□□□□□ -2.18
COL18A1P39060 AC004383.1-201ENST00000438135 289 ntBASIC1.43□□□□□ -2.18
COL18A1P39060 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.43□□□□□ -2.18
COL18A1P39060 BRK1P2-201ENST00000442875 223 ntBASIC1.43□□□□□ -2.18
COL18A1P39060 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.43□□□□□ -2.18
COL18A1P39060 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.43□□□□□ -2.18
COL18A1P39060 DYNLL1P5-201ENST00000467158 270 ntBASIC1.43□□□□□ -2.18
COL18A1P39060 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.43□□□□□ -2.18
COL18A1P39060 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.43□□□□□ -2.18
COL18A1P39060 SNORA31.3-201ENST00000516029 96 ntBASIC1.43□□□□□ -2.18
COL18A1P39060 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
COL18A1P39060 LINC00933-203ENST00000559812 219 ntBASIC1.43□□□□□ -2.18
COL18A1P39060 SUB1P4-201ENST00000566062 339 ntBASIC1.43□□□□□ -2.18
COL18A1P39060 AC090079.2-201ENST00000575289 768 ntBASIC1.43□□□□□ -2.18
COL18A1P39060 MIR4529-201ENST00000578110 78 ntBASIC1.43□□□□□ -2.18
COL18A1P39060 MTCYBP22-201ENST00000603788 447 ntBASIC1.43□□□□□ -2.18
COL18A1P39060 AL355297.2-201ENST00000604792 129 ntBASIC1.43□□□□□ -2.18
COL18A1P39060 AC072039.2-201ENST00000608883 439 ntBASIC1.43□□□□□ -2.18
COL18A1P39060 AC018645.2-201ENST00000609151 472 ntBASIC1.43□□□□□ -2.18
COL18A1P39060 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
COL18A1P39060 SNORA62.1-201ENST00000364287 154 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 RNU6-748P-201ENST00000384648 107 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
COL18A1P39060 AL359634.1-202ENST00000404721 284 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 MIR1302-8-201ENST00000408342 128 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 RNU2-63P-201ENST00000410792 194 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.42□□□□□ -2.18
COL18A1P39060 AC005534.2-201ENST00000431047 433 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 RPS15AP9-201ENST00000439856 381 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 RPL39P36-201ENST00000490784 156 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
COL18A1P39060 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.42□□□□□ -2.18
COL18A1P39060 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.42□□□□□ -2.18
COL18A1P39060 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.42□□□□□ -2.18
COL18A1P39060 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.42□□□□□ -2.18
COL18A1P39060 ROCK1P1-201ENST00000573767 549 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 AC012213.3-201ENST00000577199 777 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 BNIP3P23-201ENST00000599655 511 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 AC112220.3-201ENST00000605502 502 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 AF129408.1-201ENST00000608767 431 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.42□□□□□ -2.18
COL18A1P39060 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
COL18A1P39060 AC006386.1-201ENST00000619436 415 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 TEX21P-201ENST00000447107 1476 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
COL18A1P39060 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.42□□□□□ -2.18
COL18A1P39060 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.42□□□□□ -2.18
COL18A1P39060 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.42□□□□□ -2.18
COL18A1P39060 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.42□□□□□ -2.18
COL18A1P39060 RNU6-581P-201ENST00000516214 105 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 RNU5B-3P-201ENST00000516601 115 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.42□□□□□ -2.18
COL18A1P39060 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.42□□□□□ -2.18
COL18A1P39060 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.42□□□□□ -2.18
COL18A1P39060 MIR3126-201ENST00000577443 74 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.42□□□□□ -2.18
COL18A1P39060 AC097478.2-201ENST00000610572 514 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 AL356596.1-201ENST00000624230 379 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 AC007490.1-201ENST00000624321 703 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 AC004808.1-201ENST00000627671 721 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 U6.99-201ENST00000637524 83 ntBASIC1.42□□□□□ -2.18
COL18A1P39060 Z75746.1-201ENST00000440243 2080 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
COL18A1P39060 MIR513A1-201ENST00000385138 129 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 MIR561-201ENST00000385216 97 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 SNORA46.1-201ENST00000391069 153 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 AC119751.3-201ENST00000399720 670 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 MIR1285-1-201ENST00000408593 84 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.41□□□□□ -2.18
COL18A1P39060 AL356379.1-201ENST00000414105 126 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 RPL7P34-201ENST00000433316 712 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 MTND4P25-201ENST00000441039 533 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 CYP2C59P-201ENST00000457790 269 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.41□□□□□ -2.18
COL18A1P39060 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
COL18A1P39060 MRPS17P9-201ENST00000511924 393 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 RNU7-193P-201ENST00000516723 65 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 RNU6-64P-201ENST00000517119 105 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 SNORA31.25-201ENST00000517242 134 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 RNU2-19P-201ENST00000517288 84 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.41□□□□□ -2.18
COL18A1P39060 MTCYBP23-201ENST00000558717 1102 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.41□□□□□ -2.18
COL18A1P39060 MIR4782-201ENST00000577987 79 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms