Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 snoU13.24-201ENST00000458998 104 ntBASIC4.57□□□□□ -1.68
GPC1P35052 UQCRHP4-201ENST00000471686 272 ntBASIC4.57□□□□□ -1.68
GPC1P35052 RPSAP50-201ENST00000481955 852 ntBASIC4.57□□□□□ -1.68
GPC1P35052 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.57□□□□□ -1.68
GPC1P35052 CYCTP-201ENST00000504253 315 ntBASIC4.57□□□□□ -1.68
GPC1P35052 RNU6-1007P-201ENST00000516586 107 ntBASIC4.57□□□□□ -1.68
GPC1P35052 RNA5SP170-201ENST00000517150 101 ntBASIC4.57□□□□□ -1.68
GPC1P35052 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.57□□□□□ -1.68
GPC1P35052 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.57□□□□□ -1.68
GPC1P35052 MIR6715B-201ENST00000637172 77 ntBASIC4.57□□□□□ -1.68
GPC1P35052 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GPC1P35052 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.57□□□□□ -1.68
GPC1P35052 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
GPC1P35052 AC087190.4-201ENST00000574616 8334 ntBASIC4.57□□□□□ -1.68
GPC1P35052 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.57□□□□□ -1.68
GPC1P35052 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GPC1P35052 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GPC1P35052 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GPC1P35052 AC092268.1-201ENST00000342691 405 ntBASIC4.56□□□□□ -1.68
GPC1P35052 RNA5SP507-201ENST00000363603 121 ntBASIC4.56□□□□□ -1.68
GPC1P35052 RNU1-100P-201ENST00000365255 165 ntBASIC4.56□□□□□ -1.68
GPC1P35052 MIR765-201ENST00000390226 114 ntBASIC4.56□□□□□ -1.68
GPC1P35052 RN7SKP61-201ENST00000410642 295 ntBASIC4.56□□□□□ -1.68
GPC1P35052 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.56□□□□□ -1.68
GPC1P35052 CKS1BP6-201ENST00000424932 240 ntBASIC4.56□□□□□ -1.68
GPC1P35052 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.56□□□□□ -1.68
GPC1P35052 MTATP6P7-201ENST00000453315 681 ntBASIC4.56□□□□□ -1.68
GPC1P35052 AC079168.2-201ENST00000453977 416 ntBASIC4.56□□□□□ -1.68
GPC1P35052 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.56□□□□□ -1.68
GPC1P35052 AC109810.1-201ENST00000534066 224 ntBASIC4.56□□□□□ -1.68
GPC1P35052 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.56□□□□□ -1.68
GPC1P35052 IPO5P1-202ENST00000600039 287 ntBASIC4.56□□□□□ -1.68
GPC1P35052 SNRPGP15-201ENST00000600149 222 ntBASIC4.56□□□□□ -1.68
GPC1P35052 AP002799.1-201ENST00000623552 423 ntBASIC4.56□□□□□ -1.68
GPC1P35052 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GPC1P35052 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
GPC1P35052 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
GPC1P35052 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GPC1P35052 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.56□□□□□ -1.68
GPC1P35052 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GPC1P35052 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GPC1P35052 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GPC1P35052 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GPC1P35052 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GPC1P35052 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
GPC1P35052 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
GPC1P35052 RNU6-1181P-201ENST00000384191 106 ntBASIC4.55□□□□□ -1.68
GPC1P35052 FTH1P15-201ENST00000406984 280 ntBASIC4.55□□□□□ -1.68
GPC1P35052 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.55□□□□□ -1.68
GPC1P35052 AC078809.1-201ENST00000427601 140 ntBASIC4.55□□□□□ -1.68
GPC1P35052 RPL23AP58-201ENST00000440453 469 ntBASIC4.55□□□□□ -1.68
GPC1P35052 AC012308.1-201ENST00000451232 178 ntBASIC4.55□□□□□ -1.68
GPC1P35052 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.55□□□□□ -1.68
GPC1P35052 RN7SL558P-201ENST00000497468 299 ntBASIC4.55□□□□□ -1.68
GPC1P35052 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GPC1P35052 SNORA31.8-201ENST00000516327 108 ntBASIC4.55□□□□□ -1.68
GPC1P35052 RNU6-659P-201ENST00000516454 104 ntBASIC4.55□□□□□ -1.68
GPC1P35052 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.55□□□□□ -1.68
GPC1P35052 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GPC1P35052 CR383656.8-201ENST00000549046 145 ntBASIC4.55□□□□□ -1.68
GPC1P35052 AC133555.2-201ENST00000550213 292 ntBASIC4.55□□□□□ -1.68
GPC1P35052 AC044860.2-201ENST00000561005 179 ntBASIC4.55□□□□□ -1.68
GPC1P35052 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.55□□□□□ -1.68
GPC1P35052 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.55□□□□□ -1.68
GPC1P35052 AL121932.1-201ENST00000605542 214 ntBASIC4.55□□□□□ -1.68
GPC1P35052 RNA5SP108-201ENST00000605921 117 ntBASIC4.55□□□□□ -1.68
GPC1P35052 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.55□□□□□ -1.68
GPC1P35052 AC134026.1-201ENST00000623249 2239 ntBASIC4.55□□□□□ -1.68
GPC1P35052 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GPC1P35052 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
GPC1P35052 AC118273.1-201ENST00000525324 3006 ntBASIC4.55□□□□□ -1.68
GPC1P35052 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GPC1P35052 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.55□□□□□ -1.68
GPC1P35052 AL139811.1-201ENST00000424779 2299 ntBASIC4.55□□□□□ -1.68
GPC1P35052 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.55□□□□□ -1.68
GPC1P35052 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
GPC1P35052 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.54□□□□□ -1.68
GPC1P35052 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
GPC1P35052 RNA5SP305-201ENST00000362665 119 ntBASIC4.54□□□□□ -1.68
GPC1P35052 RNU6-1255P-201ENST00000363434 112 ntBASIC4.54□□□□□ -1.68
GPC1P35052 RNU6-801P-201ENST00000364087 105 ntBASIC4.54□□□□□ -1.68
GPC1P35052 RNU6-1279P-201ENST00000383917 103 ntBASIC4.54□□□□□ -1.68
GPC1P35052 SNORA8.3-201ENST00000384679 139 ntBASIC4.54□□□□□ -1.68
GPC1P35052 Y_RNA.572-201ENST00000384757 98 ntBASIC4.54□□□□□ -1.68
GPC1P35052 SNORA26.5-201ENST00000391215 123 ntBASIC4.54□□□□□ -1.68
GPC1P35052 MIR888-201ENST00000401186 77 ntBASIC4.54□□□□□ -1.68
GPC1P35052 U3.40-201ENST00000408706 208 ntBASIC4.54□□□□□ -1.68
GPC1P35052 RNU6-1064P-201ENST00000410626 104 ntBASIC4.54□□□□□ -1.68
GPC1P35052 AC096649.2-201ENST00000416186 393 ntBASIC4.54□□□□□ -1.68
GPC1P35052 HMGN2P30-201ENST00000423237 256 ntBASIC4.54□□□□□ -1.68
GPC1P35052 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.54□□□□□ -1.68
GPC1P35052 HMGB1P37-201ENST00000439613 609 ntBASIC4.54□□□□□ -1.68
GPC1P35052 AC112498.1-201ENST00000444401 332 ntBASIC4.54□□□□□ -1.68
GPC1P35052 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
GPC1P35052 AC093270.2-201ENST00000486157 792 ntBASIC4.54□□□□□ -1.68
GPC1P35052 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.54□□□□□ -1.68
GPC1P35052 HMGB1P22-201ENST00000505315 124 ntBASIC4.54□□□□□ -1.68
GPC1P35052 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.54□□□□□ -1.68
GPC1P35052 RNU6-436P-201ENST00000516171 114 ntBASIC4.54□□□□□ -1.68
GPC1P35052 RNU6-107P-201ENST00000516643 102 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms