Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AP006437.1-201ENST00000641440 3685 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 RNU6-179P-201ENST00000363350 107 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 RNU4-40P-201ENST00000364351 143 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 SNORA4.3-201ENST00000365564 137 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 SNORA24.1-201ENST00000384401 135 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.33□□□□□ -2.04
PTPN4P29074 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.33□□□□□ -2.04
PTPN4P29074 BTF3L4P1-201ENST00000413813 468 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 AL135786.1-201ENST00000415892 214 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 AL365338.1-201ENST00000422282 858 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 RPS3AP44-201ENST00000425466 790 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 AC133104.1-201ENST00000429100 218 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.33□□□□□ -2.04
PTPN4P29074 Z98742.2-201ENST00000431564 187 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 MTCO3P5-201ENST00000433620 714 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 MTATP6P16-201ENST00000434543 526 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.33□□□□□ -2.04
PTPN4P29074 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.33□□□□□ -2.04
PTPN4P29074 AC092001.1-201ENST00000453012 261 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.33□□□□□ -2.04
PTPN4P29074 TPT1P7-201ENST00000458300 517 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 AC116655.1-201ENST00000508324 901 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.33□□□□□ -2.04
PTPN4P29074 RNU6-410P-201ENST00000517006 107 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 MTCO2P4-201ENST00000517968 247 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.33□□□□□ -2.04
PTPN4P29074 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.33□□□□□ -2.04
PTPN4P29074 AL133241.1-201ENST00000556832 487 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 AC009063.1-201ENST00000563342 702 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 AC009127.3-201ENST00000570531 403 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.33□□□□□ -2.04
PTPN4P29074 AC093783.1-201ENST00000612976 329 ntBASIC2.33□□□□□ -2.04
PTPN4P29074 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
PTPN4P29074 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PTPN4P29074 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.32□□□□□ -2.04
PTPN4P29074 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.32□□□□□ -2.04
PTPN4P29074 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.32□□□□□ -2.04
PTPN4P29074 MTND5P17-201ENST00000418405 1603 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 Y_RNA.367-201ENST00000365544 101 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 RNU6-108P-201ENST00000365558 107 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
PTPN4P29074 RNU6-74P-201ENST00000384235 107 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 RNU6-1119P-201ENST00000384349 108 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PTPN4P29074 RNA5SP425-201ENST00000410336 112 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PTPN4P29074 OR51A5P-201ENST00000415429 942 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 Z98742.3-201ENST00000418637 326 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 AL358934.1-201ENST00000432346 324 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 GPR143P-201ENST00000434155 205 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.32□□□□□ -2.04
PTPN4P29074 HIGD1AP2-201ENST00000446367 280 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.32□□□□□ -2.04
PTPN4P29074 C1DP4-201ENST00000455429 424 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 AC018437.1-201ENST00000492214 406 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 AC234781.5-201ENST00000508429 271 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 IGLV3-17-201ENST00000519099 244 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.32□□□□□ -2.04
PTPN4P29074 RANP3-201ENST00000530970 276 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.32□□□□□ -2.04
PTPN4P29074 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.32□□□□□ -2.04
PTPN4P29074 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.32□□□□□ -2.04
PTPN4P29074 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 MIR548AC-201ENST00000585049 88 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 AC098848.2-201ENST00000588023 330 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 AL158032.1-201ENST00000605401 106 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 AC091834.1-201ENST00000614543 472 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PTPN4P29074 AC244517.12-201ENST00000623581 663 ntBASIC2.32□□□□□ -2.04
PTPN4P29074 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PTPN4P29074 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PTPN4P29074 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
PTPN4P29074 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 RNU6-181P-201ENST00000363225 107 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 RNU6-1097P-201ENST00000363586 107 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 SNORD114-30-201ENST00000364448 72 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 RNU6-61P-201ENST00000365528 109 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 RNU6-166P-201ENST00000384371 107 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 RN7SKP158-201ENST00000410453 326 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 RNU2-63P-201ENST00000410792 194 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 AL353621.1-201ENST00000418219 243 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 RPL30P4-201ENST00000429309 333 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 AL627311.1-201ENST00000431514 115 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.31□□□□□ -2.04
PTPN4P29074 AC010095.1-201ENST00000443543 144 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 AC124916.1-201ENST00000444020 547 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.31□□□□□ -2.04
PTPN4P29074 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.31□□□□□ -2.04
PTPN4P29074 AC022364.2-201ENST00000457963 554 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 AC117503.1-201ENST00000472241 394 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 MTAPP1-201ENST00000489154 819 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.31□□□□□ -2.04
PTPN4P29074 AC116562.3-201ENST00000506136 177 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.31□□□□□ -2.04
PTPN4P29074 RN7SKP298-201ENST00000515950 94 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 RNU6-123P-201ENST00000516163 102 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 RNU6-445P-201ENST00000516949 107 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 ACA59.2-201ENST00000517061 156 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 MTCYBP20-201ENST00000524239 1129 ntBASIC2.31□□□□□ -2.04
PTPN4P29074 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms