Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 OR2AT2P-201ENST00000413438 905 ntBASIC5.87□□□□□ -1.47
CD44P16070 AC009414.1-201ENST00000427200 443 ntBASIC5.87□□□□□ -1.47
CD44P16070 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.87□□□□□ -1.47
CD44P16070 AC004223.1-201ENST00000479840 271 ntBASIC5.87□□□□□ -1.47
CD44P16070 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.87□□□□□ -1.47
CD44P16070 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC5.87□□□□□ -1.47
CD44P16070 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.87□□□□□ -1.47
CD44P16070 U2.21-201ENST00000637295 81 ntBASIC5.87□□□□□ -1.47
CD44P16070 AL450345.1-202ENST00000605741 3881 ntBASIC5.87□□□□□ -1.47
CD44P16070 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CD44P16070 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CD44P16070 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CD44P16070 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CD44P16070 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CD44P16070 AC139713.2-214ENST00000642059 1811 ntBASIC5.87□□□□□ -1.47
CD44P16070 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CD44P16070 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.87□□□□□ -1.47
CD44P16070 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CD44P16070 AL672167.1-204ENST00000641875 3017 ntBASIC5.87□□□□□ -1.47
CD44P16070 AP005432.1-201ENST00000580891 3485 ntBASIC5.87□□□□□ -1.47
CD44P16070 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.87□□□□□ -1.47
CD44P16070 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CD44P16070 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CD44P16070 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.86□□□□□ -1.47
CD44P16070 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CD44P16070 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.86□□□□□ -1.47
CD44P16070 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
CD44P16070 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.86□□□□□ -1.47
CD44P16070 DLEU2_6.3-201ENST00000340052 136 ntBASIC5.86□□□□□ -1.47
CD44P16070 RNU6-887P-201ENST00000410660 100 ntBASIC5.86□□□□□ -1.47
CD44P16070 AL353705.1-201ENST00000433468 480 ntBASIC5.86□□□□□ -1.47
CD44P16070 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.86□□□□□ -1.47
CD44P16070 AL049873.1-201ENST00000480540 376 ntBASIC5.86□□□□□ -1.47
CD44P16070 AC113410.1-201ENST00000505029 247 ntBASIC5.86□□□□□ -1.47
CD44P16070 RNU6-539P-201ENST00000516665 103 ntBASIC5.86□□□□□ -1.47
CD44P16070 Y_RNA.705-201ENST00000516862 110 ntBASIC5.86□□□□□ -1.47
CD44P16070 AC022523.2-201ENST00000561045 150 ntBASIC5.86□□□□□ -1.47
CD44P16070 FKBP1AP1-201ENST00000594588 318 ntBASIC5.86□□□□□ -1.47
CD44P16070 DLEU2_6.2-201ENST00000620994 136 ntBASIC5.86□□□□□ -1.47
CD44P16070 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CD44P16070 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CD44P16070 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CD44P16070 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CD44P16070 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CD44P16070 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CD44P16070 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CD44P16070 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CD44P16070 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CD44P16070 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CD44P16070 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CD44P16070 RNA5SP335-201ENST00000363817 110 ntBASIC5.85□□□□□ -1.47
CD44P16070 RNU6-271P-201ENST00000363858 105 ntBASIC5.85□□□□□ -1.47
CD44P16070 Y_RNA.796-201ENST00000364268 102 ntBASIC5.85□□□□□ -1.47
CD44P16070 RNA5SP510-201ENST00000364697 99 ntBASIC5.85□□□□□ -1.47
CD44P16070 Y_RNA.799-201ENST00000364992 102 ntBASIC5.85□□□□□ -1.47
CD44P16070 Y_RNA.507-201ENST00000384500 99 ntBASIC5.85□□□□□ -1.47
CD44P16070 MIR1290-201ENST00000408735 78 ntBASIC5.85□□□□□ -1.47
CD44P16070 AC012308.1-201ENST00000451232 178 ntBASIC5.85□□□□□ -1.47
CD44P16070 NDUFA4P2-201ENST00000489989 244 ntBASIC5.85□□□□□ -1.47
CD44P16070 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC5.85□□□□□ -1.47
CD44P16070 MLLT10P2-201ENST00000506434 249 ntBASIC5.85□□□□□ -1.47
CD44P16070 RNA5SP440-201ENST00000612665 119 ntBASIC5.85□□□□□ -1.47
CD44P16070 RN7SL787P-201ENST00000613000 284 ntBASIC5.85□□□□□ -1.47
CD44P16070 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CD44P16070 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC5.85□□□□□ -1.47
CD44P16070 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CD44P16070 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CD44P16070 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CD44P16070 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CD44P16070 AC125336.1-201ENST00000508893 2827 ntBASIC5.84□□□□□ -1.47
CD44P16070 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CD44P16070 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.84□□□□□ -1.47
CD44P16070 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CD44P16070 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CD44P16070 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CD44P16070 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.84□□□□□ -1.47
CD44P16070 RNU6-633P-201ENST00000362612 103 ntBASIC5.84□□□□□ -1.47
CD44P16070 Y_RNA.340-201ENST00000365330 92 ntBASIC5.84□□□□□ -1.47
CD44P16070 MIR1185-2-201ENST00000408687 86 ntBASIC5.84□□□□□ -1.47
CD44P16070 CYCSP19-201ENST00000411715 316 ntBASIC5.84□□□□□ -1.47
CD44P16070 HMGN2P27-201ENST00000427352 270 ntBASIC5.84□□□□□ -1.47
CD44P16070 RPS12P18-201ENST00000442381 270 ntBASIC5.84□□□□□ -1.47
CD44P16070 RPL21P129-201ENST00000491732 478 ntBASIC5.84□□□□□ -1.47
CD44P16070 RNU6-63P-201ENST00000516690 95 ntBASIC5.84□□□□□ -1.47
CD44P16070 RNU2-44P-201ENST00000516795 194 ntBASIC5.84□□□□□ -1.47
CD44P16070 EIF4A1P12-201ENST00000551910 141 ntBASIC5.84□□□□□ -1.47
CD44P16070 AC091304.10-201ENST00000641554 121 ntBASIC5.84□□□□□ -1.47
CD44P16070 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.84□□□□□ -1.47
CD44P16070 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC5.84□□□□□ -1.47
CD44P16070 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
CD44P16070 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CD44P16070 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.84□□□□□ -1.47
CD44P16070 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CD44P16070 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.84□□□□□ -1.48
CD44P16070 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.83□□□□□ -1.48
CD44P16070 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CD44P16070 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CD44P16070 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CD44P16070 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CD44P16070 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms