Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AP003034.1-201ENST00000534621 422 ntBASIC-0.03□□□□□ -2.41
APOBP04114 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
APOBP04114 AC136619.2-201ENST00000563361 631 ntBASIC-0.03□□□□□ -2.41
APOBP04114 MIR4290-201ENST00000583807 95 ntBASIC-0.03□□□□□ -2.41
APOBP04114 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC-0.03□□□□□ -2.41
APOBP04114 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
APOBP04114 AL391994.1-201ENST00000254724 282 ntBASIC-0.04□□□□□ -2.42
APOBP04114 MIR1207-201ENST00000408249 87 ntBASIC-0.04□□□□□ -2.42
APOBP04114 SNX3P1X-201ENST00000414887 175 ntBASIC-0.04□□□□□ -2.42
APOBP04114 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC-0.04□□□□□ -2.42
APOBP04114 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC-0.04□□□□□ -2.42
APOBP04114 AC107954.1-201ENST00000565906 727 ntBASIC-0.04□□□□□ -2.42
APOBP04114 AL356432.3-201ENST00000568952 465 ntBASIC-0.04□□□□□ -2.42
APOBP04114 MIR4765-201ENST00000585007 77 ntBASIC-0.04□□□□□ -2.42
APOBP04114 AC068790.6-201ENST00000602558 258 ntBASIC-0.04□□□□□ -2.42
APOBP04114 AC096586.2-201ENST00000610260 441 ntBASIC-0.04□□□□□ -2.42
APOBP04114 AL513185.3-201ENST00000433335 1300 ntBASIC-0.04□□□□□ -2.42
APOBP04114 C1DP1-201ENST00000426049 402 ntBASIC-0.04□□□□□ -2.42
APOBP04114 AC004062.1-201ENST00000509926 645 ntBASIC-0.04□□□□□ -2.42
APOBP04114 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC-0.04□□□□□ -2.42
APOBP04114 AC092474.3-201ENST00000603022 568 ntBASIC-0.04□□□□□ -2.42
APOBP04114 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC-0.04□□□□□ -2.42
APOBP04114 MIR4315-1-201ENST00000636800 73 ntBASIC-0.04□□□□□ -2.42
APOBP04114 MIR4315-2-201ENST00000640925 73 ntBASIC-0.04□□□□□ -2.42
APOBP04114 AL136372.1-201ENST00000403060 228 ntBASIC-0.04□□□□□ -2.42
APOBP04114 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.04□□□□□ -2.42
APOBP04114 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.04□□□□□ -2.42
APOBP04114 AC092047.1-201ENST00000424997 240 ntBASIC-0.04□□□□□ -2.42
APOBP04114 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC-0.04□□□□□ -2.42
APOBP04114 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.04□□□□□ -2.42
APOBP04114 RAP1BP2-201ENST00000478270 544 ntBASIC-0.04□□□□□ -2.42
APOBP04114 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.04□□□□□ -2.42
APOBP04114 RNU6-889P-201ENST00000517189 103 ntBASIC-0.04□□□□□ -2.42
APOBP04114 AC073349.3-201ENST00000617616 186 ntBASIC-0.04□□□□□ -2.42
APOBP04114 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
APOBP04114 SNORD89-201ENST00000390981 114 ntBASIC-0.04□□□□□ -2.42
APOBP04114 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.04□□□□□ -2.42
APOBP04114 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC-0.04□□□□□ -2.42
APOBP04114 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.04□□□□□ -2.42
APOBP04114 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.04□□□□□ -2.42
APOBP04114 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC-0.04□□□□□ -2.42
APOBP04114 AC002400.1-201ENST00000569310 726 ntBASIC-0.04□□□□□ -2.42
APOBP04114 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC-0.04□□□□□ -2.42
APOBP04114 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC-0.04□□□□□ -2.42
APOBP04114 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC-0.05□□□□□ -2.42
APOBP04114 RNA5SP391-201ENST00000363456 119 ntBASIC-0.05□□□□□ -2.42
APOBP04114 RNU6-112P-201ENST00000363599 104 ntBASIC-0.05□□□□□ -2.42
APOBP04114 MIR518D-201ENST00000385014 87 ntBASIC-0.05□□□□□ -2.42
APOBP04114 RNU6-1328P-201ENST00000410938 106 ntBASIC-0.05□□□□□ -2.42
APOBP04114 CETN4P-201ENST00000432407 469 ntBASIC-0.05□□□□□ -2.42
APOBP04114 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC-0.05□□□□□ -2.42
APOBP04114 RNU6-782P-201ENST00000516852 104 ntBASIC-0.05□□□□□ -2.42
APOBP04114 NRON-201ENST00000517270 370 ntBASIC-0.05□□□□□ -2.42
APOBP04114 MIR8074-201ENST00000615081 81 ntBASIC-0.05□□□□□ -2.42
APOBP04114 RNU6-1065P-201ENST00000384513 106 ntBASIC-0.05□□□□□ -2.42
APOBP04114 MIR942-201ENST00000401111 86 ntBASIC-0.05□□□□□ -2.42
APOBP04114 PTGES3P4-201ENST00000426243 356 ntBASIC-0.05□□□□□ -2.42
APOBP04114 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC-0.05□□□□□ -2.42
APOBP04114 AC105758.1-201ENST00000506038 399 ntBASIC-0.05□□□□□ -2.42
APOBP04114 SNORA70.22-201ENST00000517160 124 ntBASIC-0.05□□□□□ -2.42
APOBP04114 RNU6-902P-201ENST00000517212 91 ntBASIC-0.05□□□□□ -2.42
APOBP04114 AC022616.8-201ENST00000533569 253 ntBASIC-0.05□□□□□ -2.42
APOBP04114 AC016256.1-201ENST00000547971 354 ntBASIC-0.05□□□□□ -2.42
APOBP04114 AP002826.1-201ENST00000608835 315 ntBASIC-0.05□□□□□ -2.42
APOBP04114 AL391597.1-201ENST00000618707 694 ntBASIC-0.05□□□□□ -2.42
APOBP04114 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.05□□□□□ -2.42
APOBP04114 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.05□□□□□ -2.42
APOBP04114 snoU13.21-201ENST00000459368 105 ntBASIC-0.05□□□□□ -2.42
APOBP04114 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC-0.05□□□□□ -2.42
APOBP04114 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC-0.05□□□□□ -2.42
APOBP04114 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
APOBP04114 AC023934.1-201ENST00000574529 2389 ntBASIC-0.05□□□□□ -2.42
APOBP04114 RNU4-48P-201ENST00000365559 182 ntBASIC-0.06□□□□□ -2.42
APOBP04114 MIR1267-201ENST00000408723 78 ntBASIC-0.06□□□□□ -2.42
APOBP04114 Z82190.1-201ENST00000454534 490 ntBASIC-0.06□□□□□ -2.42
APOBP04114 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.06□□□□□ -2.42
APOBP04114 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.06□□□□□ -2.42
APOBP04114 IGJP1-201ENST00000522682 475 ntBASIC-0.06□□□□□ -2.42
APOBP04114 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.06□□□□□ -2.42
APOBP04114 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.06□□□□□ -2.42
APOBP04114 RNU1-119P-201ENST00000391122 165 ntBASIC-0.06□□□□□ -2.42
APOBP04114 DHFRP6-201ENST00000401776 268 ntBASIC-0.06□□□□□ -2.42
APOBP04114 AL591034.2-201ENST00000402839 359 ntBASIC-0.06□□□□□ -2.42
APOBP04114 AC139712.2-201ENST00000424302 339 ntBASIC-0.06□□□□□ -2.42
APOBP04114 UBE2V1P4-201ENST00000425374 344 ntBASIC-0.06□□□□□ -2.42
APOBP04114 AC092423.1-201ENST00000430165 186 ntBASIC-0.06□□□□□ -2.42
APOBP04114 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC-0.06□□□□□ -2.42
APOBP04114 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC-0.06□□□□□ -2.42
APOBP04114 RNU6-491P-201ENST00000516099 110 ntBASIC-0.06□□□□□ -2.42
APOBP04114 MIR3678-201ENST00000578455 94 ntBASIC-0.06□□□□□ -2.42
APOBP04114 MIR8064-201ENST00000612863 90 ntBASIC-0.06□□□□□ -2.42
APOBP04114 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.06□□□□□ -2.42
APOBP04114 SNORD115-41-201ENST00000363608 82 ntBASIC-0.06□□□□□ -2.42
APOBP04114 MIR518A1-201ENST00000385068 85 ntBASIC-0.06□□□□□ -2.42
APOBP04114 AL160275.3-201ENST00000423876 471 ntBASIC-0.06□□□□□ -2.42
APOBP04114 PNRC2P1-201ENST00000423940 420 ntBASIC-0.06□□□□□ -2.42
APOBP04114 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC-0.06□□□□□ -2.42
APOBP04114 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC-0.06□□□□□ -2.42
APOBP04114 MTCYBP27-201ENST00000555160 670 ntBASIC-0.06□□□□□ -2.42
APOBP04114 ADAM3B-201ENST00000569937 840 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms