Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AL109809.4-201ENST00000603520 2185 ntBASIC2.97□□□□□ -1.93
RTN3O95197 AL359854.1-201ENST00000614203 1594 ntBASIC2.96□□□□□ -1.94
RTN3O95197 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.96□□□□□ -1.94
RTN3O95197 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.96□□□□□ -1.94
RTN3O95197 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RTN3O95197 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RTN3O95197 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
RTN3O95197 RNU6-858P-201ENST00000362436 107 ntBASIC2.96□□□□□ -1.94
RTN3O95197 SNORA25.6-201ENST00000364121 118 ntBASIC2.96□□□□□ -1.94
RTN3O95197 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
RTN3O95197 RNU6-1328P-201ENST00000410938 106 ntBASIC2.96□□□□□ -1.94
RTN3O95197 UBE2V1P10-201ENST00000414685 269 ntBASIC2.96□□□□□ -1.94
RTN3O95197 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.96□□□□□ -1.94
RTN3O95197 AC092427.1-202ENST00000430569 476 ntBASIC2.96□□□□□ -1.94
RTN3O95197 MICF-203ENST00000432679 129 ntBASIC2.96□□□□□ -1.94
RTN3O95197 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.96□□□□□ -1.94
RTN3O95197 TPTE2P5-203ENST00000458118 728 ntBASIC2.96□□□□□ -1.94
RTN3O95197 AL121769.1-201ENST00000469473 401 ntBASIC2.96□□□□□ -1.94
RTN3O95197 AC079140.5-201ENST00000507882 310 ntBASIC2.96□□□□□ -1.94
RTN3O95197 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.96□□□□□ -1.94
RTN3O95197 RNU2-69P-201ENST00000516061 100 ntBASIC2.96□□□□□ -1.94
RTN3O95197 RNU6-720P-201ENST00000516363 108 ntBASIC2.96□□□□□ -1.94
RTN3O95197 RNU6-506P-201ENST00000516553 94 ntBASIC2.96□□□□□ -1.94
RTN3O95197 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.96□□□□□ -1.94
RTN3O95197 HPRT1P3-201ENST00000539521 576 ntBASIC2.96□□□□□ -1.94
RTN3O95197 AL512310.1-201ENST00000548639 172 ntBASIC2.96□□□□□ -1.94
RTN3O95197 EIF1P4-201ENST00000572664 335 ntBASIC2.96□□□□□ -1.94
RTN3O95197 AC009163.5-201ENST00000575421 637 ntBASIC2.96□□□□□ -1.94
RTN3O95197 MIR4765-201ENST00000585007 77 ntBASIC2.96□□□□□ -1.94
RTN3O95197 AC090115.4-201ENST00000609970 188 ntBASIC2.96□□□□□ -1.94
RTN3O95197 AC026585.1-201ENST00000619582 524 ntBASIC2.96□□□□□ -1.94
RTN3O95197 AC138627.2-201ENST00000624202 601 ntBASIC2.96□□□□□ -1.94
RTN3O95197 MIR7157-201ENST00000635801 60 ntBASIC2.96□□□□□ -1.94
RTN3O95197 FO624990.1-201ENST00000636373 85 ntBASIC2.96□□□□□ -1.94
RTN3O95197 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
RTN3O95197 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RTN3O95197 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.96□□□□□ -1.94
RTN3O95197 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.95□□□□□ -1.94
RTN3O95197 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
RTN3O95197 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.95□□□□□ -1.94
RTN3O95197 RNU6-942P-201ENST00000363002 107 ntBASIC2.95□□□□□ -1.94
RTN3O95197 Y_RNA.480-201ENST00000384364 102 ntBASIC2.95□□□□□ -1.94
RTN3O95197 SNORA16.2-201ENST00000390991 127 ntBASIC2.95□□□□□ -1.94
RTN3O95197 RPS4XP7-201ENST00000406274 780 ntBASIC2.95□□□□□ -1.94
RTN3O95197 AL606923.1-201ENST00000406616 190 ntBASIC2.95□□□□□ -1.94
RTN3O95197 BTF3P7-201ENST00000407097 488 ntBASIC2.95□□□□□ -1.94
RTN3O95197 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.95□□□□□ -1.94
RTN3O95197 CYCSP33-201ENST00000414485 327 ntBASIC2.95□□□□□ -1.94
RTN3O95197 FABP5P14-201ENST00000437273 393 ntBASIC2.95□□□□□ -1.94
RTN3O95197 CALM1P1-201ENST00000442082 433 ntBASIC2.95□□□□□ -1.94
RTN3O95197 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.95□□□□□ -1.94
RTN3O95197 PRPS1P1-201ENST00000445305 876 ntBASIC2.95□□□□□ -1.94
RTN3O95197 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.95□□□□□ -1.94
RTN3O95197 RNU7-180P-201ENST00000459240 63 ntBASIC2.95□□□□□ -1.94
RTN3O95197 MED28P2-201ENST00000475771 317 ntBASIC2.95□□□□□ -1.94
RTN3O95197 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.95□□□□□ -1.94
RTN3O95197 AC009646.1-201ENST00000510455 318 ntBASIC2.95□□□□□ -1.94
RTN3O95197 RNA5SP356-201ENST00000515972 94 ntBASIC2.95□□□□□ -1.94
RTN3O95197 RNU5B-3P-201ENST00000516601 115 ntBASIC2.95□□□□□ -1.94
RTN3O95197 RN7SKP40-201ENST00000517211 242 ntBASIC2.95□□□□□ -1.94
RTN3O95197 AC022880.1-201ENST00000534017 973 ntBASIC2.95□□□□□ -1.94
RTN3O95197 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.95□□□□□ -1.94
RTN3O95197 MTCO3P23-201ENST00000561363 289 ntBASIC2.95□□□□□ -1.94
RTN3O95197 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.95□□□□□ -1.94
RTN3O95197 ATP1B3P1-201ENST00000605365 821 ntBASIC2.95□□□□□ -1.94
RTN3O95197 RNU6-91P-201ENST00000607774 107 ntBASIC2.95□□□□□ -1.94
RTN3O95197 AC093788.1-201ENST00000609356 927 ntBASIC2.95□□□□□ -1.94
RTN3O95197 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.95□□□□□ -1.94
RTN3O95197 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
RTN3O95197 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.94□□□□□ -1.94
RTN3O95197 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
RTN3O95197 AC080128.1-201ENST00000474389 1917 ntBASIC2.94□□□□□ -1.94
RTN3O95197 AC138393.1-203ENST00000327086 343 ntBASIC2.94□□□□□ -1.94
RTN3O95197 Y_RNA.399-201ENST00000383955 105 ntBASIC2.94□□□□□ -1.94
RTN3O95197 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
RTN3O95197 BX682237.1-201ENST00000415016 335 ntBASIC2.94□□□□□ -1.94
RTN3O95197 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RTN3O95197 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.94□□□□□ -1.94
RTN3O95197 AL365400.1-201ENST00000431854 640 ntBASIC2.94□□□□□ -1.94
RTN3O95197 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.94□□□□□ -1.94
RTN3O95197 AC012308.1-201ENST00000451232 178 ntBASIC2.94□□□□□ -1.94
RTN3O95197 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.94□□□□□ -1.94
RTN3O95197 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.94□□□□□ -1.94
RTN3O95197 AC090525.1-201ENST00000479116 478 ntBASIC2.94□□□□□ -1.94
RTN3O95197 AC019235.1-201ENST00000503847 207 ntBASIC2.94□□□□□ -1.94
RTN3O95197 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.94□□□□□ -1.94
RTN3O95197 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.94□□□□□ -1.94
RTN3O95197 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.94□□□□□ -1.94
RTN3O95197 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.94□□□□□ -1.94
RTN3O95197 RNA5SP112-201ENST00000515937 99 ntBASIC2.94□□□□□ -1.94
RTN3O95197 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.94□□□□□ -1.94
RTN3O95197 Y_RNA.693-201ENST00000516641 110 ntBASIC2.94□□□□□ -1.94
RTN3O95197 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.94□□□□□ -1.94
RTN3O95197 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.94□□□□□ -1.94
RTN3O95197 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.94□□□□□ -1.94
RTN3O95197 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.94□□□□□ -1.94
RTN3O95197 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.94□□□□□ -1.94
RTN3O95197 AC090616.3-201ENST00000582184 217 ntBASIC2.94□□□□□ -1.94
RTN3O95197 MIR3941-201ENST00000582572 103 ntBASIC2.94□□□□□ -1.94
RTN3O95197 MIR3117-201ENST00000584034 78 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms