Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA3O60609 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA3O60609 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA3O60609 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA3O60609 SNORD115-13-201ENST00000363358 82 ntBASIC4.81□□□□□ -1.64
GFRA3O60609 RNU6-799P-201ENST00000363567 107 ntBASIC4.81□□□□□ -1.64
GFRA3O60609 RNY4P6-201ENST00000363667 96 ntBASIC4.81□□□□□ -1.64
GFRA3O60609 SNORD115-16-201ENST00000363887 82 ntBASIC4.81□□□□□ -1.64
GFRA3O60609 RNU1-133P-201ENST00000364867 167 ntBASIC4.81□□□□□ -1.64
GFRA3O60609 SNORD115-1-201ENST00000364961 82 ntBASIC4.81□□□□□ -1.64
GFRA3O60609 U3.15-201ENST00000365398 212 ntBASIC4.81□□□□□ -1.64
GFRA3O60609 RPS26P42-201ENST00000413485 326 ntBASIC4.81□□□□□ -1.64
GFRA3O60609 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.81□□□□□ -1.64
GFRA3O60609 AF228730.3-201ENST00000436691 102 ntBASIC4.81□□□□□ -1.64
GFRA3O60609 AC007215.1-201ENST00000464893 276 ntBASIC4.81□□□□□ -1.64
GFRA3O60609 AC117454.1-201ENST00000491120 168 ntBASIC4.81□□□□□ -1.64
GFRA3O60609 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.81□□□□□ -1.64
GFRA3O60609 AL138880.2-201ENST00000616214 239 ntBASIC4.81□□□□□ -1.64
GFRA3O60609 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.81□□□□□ -1.64
GFRA3O60609 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA3O60609 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.81□□□□□ -1.64
GFRA3O60609 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA3O60609 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.81□□□□□ -1.64
GFRA3O60609 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA3O60609 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA3O60609 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA3O60609 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA3O60609 ZNF402P-201ENST00000404435 3100 ntBASIC4.81□□□□□ -1.64
GFRA3O60609 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA3O60609 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.81□□□□□ -1.64
GFRA3O60609 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA3O60609 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GFRA3O60609 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
GFRA3O60609 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GFRA3O60609 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.8□□□□□ -1.64
GFRA3O60609 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GFRA3O60609 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
GFRA3O60609 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GFRA3O60609 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GFRA3O60609 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
GFRA3O60609 Y_RNA.361-201ENST00000365515 120 ntBASIC4.8□□□□□ -1.64
GFRA3O60609 RNU6-418P-201ENST00000384035 107 ntBASIC4.8□□□□□ -1.64
GFRA3O60609 RNU6-729P-201ENST00000384399 107 ntBASIC4.8□□□□□ -1.64
GFRA3O60609 RN7SKP101-201ENST00000411376 320 ntBASIC4.8□□□□□ -1.64
GFRA3O60609 MRPS21P3-201ENST00000436696 262 ntBASIC4.8□□□□□ -1.64
GFRA3O60609 AL133244.1-201ENST00000456007 258 ntBASIC4.8□□□□□ -1.64
GFRA3O60609 SCARNA23-201ENST00000516060 130 ntBASIC4.8□□□□□ -1.64
GFRA3O60609 RNA5SP236-201ENST00000516169 116 ntBASIC4.8□□□□□ -1.64
GFRA3O60609 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.8□□□□□ -1.64
GFRA3O60609 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.8□□□□□ -1.64
GFRA3O60609 AC012468.1-201ENST00000604888 430 ntBASIC4.8□□□□□ -1.64
GFRA3O60609 AC244107.2-201ENST00000611773 76 ntBASIC4.8□□□□□ -1.64
GFRA3O60609 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.8□□□□□ -1.64
GFRA3O60609 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GFRA3O60609 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.8□□□□□ -1.64
GFRA3O60609 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
GFRA3O60609 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GFRA3O60609 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
GFRA3O60609 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GFRA3O60609 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
GFRA3O60609 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GFRA3O60609 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GFRA3O60609 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
GFRA3O60609 RNU1-62P-201ENST00000362599 164 ntBASIC4.79□□□□□ -1.64
GFRA3O60609 Y_RNA.198-201ENST00000364013 98 ntBASIC4.79□□□□□ -1.64
GFRA3O60609 U1.1-201ENST00000384101 164 ntBASIC4.79□□□□□ -1.64
GFRA3O60609 MIR449B-201ENST00000384995 97 ntBASIC4.79□□□□□ -1.64
GFRA3O60609 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
GFRA3O60609 AL357515.1-201ENST00000402967 542 ntBASIC4.79□□□□□ -1.64
GFRA3O60609 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
GFRA3O60609 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.79□□□□□ -1.64
GFRA3O60609 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
GFRA3O60609 AC073073.1-201ENST00000493920 463 ntBASIC4.79□□□□□ -1.64
GFRA3O60609 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.79□□□□□ -1.64
GFRA3O60609 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.79□□□□□ -1.64
GFRA3O60609 RNU6-1299P-201ENST00000516316 100 ntBASIC4.79□□□□□ -1.64
GFRA3O60609 RNU7-115P-201ENST00000516433 55 ntBASIC4.79□□□□□ -1.64
GFRA3O60609 RNU6-572P-201ENST00000516724 80 ntBASIC4.79□□□□□ -1.64
GFRA3O60609 RN7SL176P-201ENST00000580352 264 ntBASIC4.79□□□□□ -1.64
GFRA3O60609 AC053481.4-201ENST00000583164 216 ntBASIC4.79□□□□□ -1.64
GFRA3O60609 AP005432.2-201ENST00000608162 586 ntBASIC4.79□□□□□ -1.64
GFRA3O60609 AL137067.1-201ENST00000615933 120 ntBASIC4.79□□□□□ -1.64
GFRA3O60609 RNA5SP439-201ENST00000617595 124 ntBASIC4.79□□□□□ -1.64
GFRA3O60609 MIR548AY-201ENST00000617669 107 ntBASIC4.79□□□□□ -1.64
GFRA3O60609 AC019206.1-201ENST00000621938 425 ntBASIC4.79□□□□□ -1.64
GFRA3O60609 MIR492-201ENST00000638676 116 ntBASIC4.79□□□□□ -1.64
GFRA3O60609 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GFRA3O60609 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GFRA3O60609 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
GFRA3O60609 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.79□□□□□ -1.64
GFRA3O60609 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GFRA3O60609 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.79□□□□□ -1.64
GFRA3O60609 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GFRA3O60609 AC104964.3-201ENST00000606115 2860 ntBASIC4.79□□□□□ -1.64
GFRA3O60609 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GFRA3O60609 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA3O60609 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA3O60609 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.78□□□□□ -1.64
GFRA3O60609 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GFRA3O60609 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms