Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SSNA1O43805 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.12□□□□□ -2.23
SSNA1O43805 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.12□□□□□ -2.23
SSNA1O43805 AL139824.2-201ENST00000458731 1095 ntBASIC1.12□□□□□ -2.23
SSNA1O43805 snoU13.14-201ENST00000459372 104 ntBASIC1.12□□□□□ -2.23
SSNA1O43805 RPS26P55-201ENST00000471178 356 ntBASIC1.12□□□□□ -2.23
SSNA1O43805 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.12□□□□□ -2.23
SSNA1O43805 AC079395.1-201ENST00000510981 262 ntBASIC1.12□□□□□ -2.23
SSNA1O43805 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.12□□□□□ -2.23
SSNA1O43805 AC019288.1-201ENST00000557918 224 ntBASIC1.12□□□□□ -2.23
SSNA1O43805 SNORD53B-201ENST00000577887 78 ntBASIC1.12□□□□□ -2.23
SSNA1O43805 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.12□□□□□ -2.23
SSNA1O43805 AL596327.1-201ENST00000603629 213 ntBASIC1.12□□□□□ -2.23
SSNA1O43805 AP000860.1-201ENST00000605250 559 ntBASIC1.12□□□□□ -2.23
SSNA1O43805 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.12□□□□□ -2.23
SSNA1O43805 RNU6-395P-201ENST00000365662 106 ntBASIC1.11□□□□□ -2.23
SSNA1O43805 RNU6-72P-201ENST00000384285 79 ntBASIC1.11□□□□□ -2.23
SSNA1O43805 RNU6-160P-201ENST00000384591 107 ntBASIC1.11□□□□□ -2.23
SSNA1O43805 SNORA67.6-201ENST00000391093 99 ntBASIC1.11□□□□□ -2.23
SSNA1O43805 RPS27P16-201ENST00000425758 201 ntBASIC1.11□□□□□ -2.23
SSNA1O43805 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.11□□□□□ -2.23
SSNA1O43805 TIMM9P1-201ENST00000436122 256 ntBASIC1.11□□□□□ -2.23
SSNA1O43805 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.11□□□□□ -2.23
SSNA1O43805 AC087477.1-201ENST00000465747 340 ntBASIC1.11□□□□□ -2.23
SSNA1O43805 RNU6-677P-201ENST00000516914 101 ntBASIC1.11□□□□□ -2.23
SSNA1O43805 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.11□□□□□ -2.23
SSNA1O43805 AP002770.2-201ENST00000543613 532 ntBASIC1.11□□□□□ -2.23
SSNA1O43805 CR383656.8-201ENST00000549046 145 ntBASIC1.11□□□□□ -2.23
SSNA1O43805 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.11□□□□□ -2.23
SSNA1O43805 AC005668.1-201ENST00000571142 476 ntBASIC1.11□□□□□ -2.23
SSNA1O43805 SNORA77B-201ENST00000578179 125 ntBASIC1.11□□□□□ -2.23
SSNA1O43805 MIR3162-201ENST00000581818 82 ntBASIC1.11□□□□□ -2.23
SSNA1O43805 AL050343.2-201ENST00000607338 280 ntBASIC1.11□□□□□ -2.23
SSNA1O43805 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.11□□□□□ -2.23
SSNA1O43805 AC126544.2-201ENST00000625174 749 ntBASIC1.11□□□□□ -2.23
SSNA1O43805 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SSNA1O43805 SNORD3E-201ENST00000362899 217 ntBASIC1.1□□□□□ -2.23
SSNA1O43805 SNORD116-20-201ENST00000384529 92 ntBASIC1.1□□□□□ -2.23
SSNA1O43805 MIR1305-201ENST00000408300 86 ntBASIC1.1□□□□□ -2.23
SSNA1O43805 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
SSNA1O43805 MIR1267-201ENST00000408723 78 ntBASIC1.1□□□□□ -2.23
SSNA1O43805 Y_RNA.597-201ENST00000410463 100 ntBASIC1.1□□□□□ -2.23
SSNA1O43805 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.1□□□□□ -2.23
SSNA1O43805 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.1□□□□□ -2.23
SSNA1O43805 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.1□□□□□ -2.23
SSNA1O43805 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SSNA1O43805 AC093899.1-201ENST00000457984 376 ntBASIC1.1□□□□□ -2.23
SSNA1O43805 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.1□□□□□ -2.23
SSNA1O43805 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.1□□□□□ -2.23
SSNA1O43805 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.1□□□□□ -2.23
SSNA1O43805 AC090821.2-201ENST00000523552 176 ntBASIC1.1□□□□□ -2.23
SSNA1O43805 AC087276.1-201ENST00000529659 480 ntBASIC1.1□□□□□ -2.23
SSNA1O43805 RPL21P5-201ENST00000554662 472 ntBASIC1.1□□□□□ -2.23
SSNA1O43805 MIR15A-201ENST00000607334 83 ntBASIC1.1□□□□□ -2.23
SSNA1O43805 AC063943.3-201ENST00000615562 356 ntBASIC1.1□□□□□ -2.23
SSNA1O43805 AC130454.1-201ENST00000622948 401 ntBASIC1.1□□□□□ -2.23
SSNA1O43805 AP003476.1-201ENST00000623984 516 ntBASIC1.1□□□□□ -2.23
SSNA1O43805 AC022513.1-201ENST00000624512 117 ntBASIC1.1□□□□□ -2.23
SSNA1O43805 AC008993.2-201ENST00000631744 806 ntBASIC1.1□□□□□ -2.23
SSNA1O43805 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.1□□□□□ -2.23
SSNA1O43805 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.09□□□□□ -2.23
SSNA1O43805 RNU6-462P-201ENST00000362659 105 ntBASIC1.09□□□□□ -2.23
SSNA1O43805 SNORD114-6-201ENST00000364393 72 ntBASIC1.09□□□□□ -2.23
SSNA1O43805 Y_RNA.472-201ENST00000384322 102 ntBASIC1.09□□□□□ -2.23
SSNA1O43805 MIR504-201ENST00000385065 83 ntBASIC1.09□□□□□ -2.23
SSNA1O43805 AL356967.1-201ENST00000406305 431 ntBASIC1.09□□□□□ -2.23
SSNA1O43805 Y_RNA.623-201ENST00000411128 95 ntBASIC1.09□□□□□ -2.23
SSNA1O43805 AL669831.1-202ENST00000428504 417 ntBASIC1.09□□□□□ -2.23
SSNA1O43805 RPS15AP10-201ENST00000432472 382 ntBASIC1.09□□□□□ -2.23
SSNA1O43805 LARP1BP3-201ENST00000437229 869 ntBASIC1.09□□□□□ -2.23
SSNA1O43805 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.09□□□□□ -2.23
SSNA1O43805 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.09□□□□□ -2.23
SSNA1O43805 CALM1P1-201ENST00000442082 433 ntBASIC1.09□□□□□ -2.23
SSNA1O43805 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.09□□□□□ -2.23
SSNA1O43805 AC130509.1-201ENST00000464158 433 ntBASIC1.09□□□□□ -2.23
SSNA1O43805 AC069306.1-201ENST00000507006 843 ntBASIC1.09□□□□□ -2.23
SSNA1O43805 AC109445.1-201ENST00000512356 383 ntBASIC1.09□□□□□ -2.23
SSNA1O43805 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.09□□□□□ -2.23
SSNA1O43805 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.09□□□□□ -2.23
SSNA1O43805 AC123912.5-201ENST00000605470 343 ntBASIC1.09□□□□□ -2.23
SSNA1O43805 AL355816.2-201ENST00000610049 647 ntBASIC1.09□□□□□ -2.23
SSNA1O43805 AL121890.5-201ENST00000620848 304 ntBASIC1.09□□□□□ -2.23
SSNA1O43805 MIR8063-201ENST00000621930 81 ntBASIC1.09□□□□□ -2.23
SSNA1O43805 AC092104.1-201ENST00000497346 1441 ntBASIC1.08□□□□□ -2.24
SSNA1O43805 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SSNA1O43805 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SSNA1O43805 MIR302D-201ENST00000362275 68 ntBASIC1.08□□□□□ -2.24
SSNA1O43805 RNU6-112P-201ENST00000363599 104 ntBASIC1.08□□□□□ -2.24
SSNA1O43805 RNU6-414P-201ENST00000363705 104 ntBASIC1.08□□□□□ -2.24
SSNA1O43805 AL627390.1-201ENST00000396055 340 ntBASIC1.08□□□□□ -2.24
SSNA1O43805 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.08□□□□□ -2.24
SSNA1O43805 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.08□□□□□ -2.24
SSNA1O43805 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SSNA1O43805 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.08□□□□□ -2.24
SSNA1O43805 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.08□□□□□ -2.24
SSNA1O43805 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.08□□□□□ -2.24
SSNA1O43805 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.08□□□□□ -2.24
SSNA1O43805 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.08□□□□□ -2.24
SSNA1O43805 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.08□□□□□ -2.24
SSNA1O43805 AC119751.4-201ENST00000507498 357 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms